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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g542000v5   uncharacterized protein 
 cre-r.1   CHLRE_12g541851v5   uncharacterized protein 
 ath-u.5   AT4G18460   D-Tyr-tRNA(Tyr) deacylase family protein 
 gma-u.5   100813154   D-aminoacyl-tRNA deacylase 
 gma-u.5   100787782   D-aminoacyl-tRNA deacylase 
 sly-u.5   101245317   uncharacterized LOC101245317 
 osa-u.5   4327697   uncharacterized LOC4327697 
 zma-u.5   100282840   D-tyrosyl-tRNA 
 bra-r.6   103856405   D-aminoacyl-tRNA deacylase 
 vvi-u.5   100252068   uncharacterized LOC100252068 
 ppo-u.5   18103106   uncharacterized LOC18103106 
 mtr-u.5   11441122   D-aminoacyl-tRNA deacylase 
 tae-r.2   123077985   D-aminoacyl-tRNA deacylase 
 hvu-r.1   123443337   D-aminoacyl-tRNA deacylase 
 ghi-r.1   121208565   D-aminoacyl-tRNA deacylase 
 ghi-r.1   107925143   D-aminoacyl-tRNA deacylase 
 bna-r.1   106430025   D-aminoacyl-tRNA deacylase-like 
 bna-r.1   106430178   D-aminoacyl-tRNA deacylase-like 
 sbi-r.1   8078781   D-tyrosyl-tRNA(Tyr) deacylase 
 sot-r.1   102579097   D-tyrosyl-tRNA(Tyr) deacylase 
 cit-r.1   102624541   uncharacterized LOC102624541 
 bdi-r.1   100832436   D-aminoacyl-tRNA deacylase 
 nta-r.1   107784668   uncharacterized LOC107784668 
 nta-r.1   107792835   uncharacterized LOC107792835 

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Top 50 coexpressed genes to CHLRE_12g542000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g542000v5 (cre-r.1 coexpression data)

CoexMap"5719514"


creCHLRE_12g542000v5 | Entrez gene ID : 5719514      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 2 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006399 [list] [network] tRNA metabolic process  (155 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0051500 [list] [network] D-tyrosyl-tRNA(Tyr) deacylase activity  (1 genes)  IEA  
Protein XP_001693919.2 [sequence] [blastp]
XP_042919184.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_001693919.2)
chlo 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_042919184.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001693919.2)
other 6  (predict for XP_042919184.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g542000v5
cre-r.1
for
CHLRE_12g541851v5
ath-u.5
for
AT4G18460
gma-u.5
for
100813154
gma-u.5
for
100787782
sly-u.5
for
101245317
osa-u.5
for
4327697
zma-u.5
for
100282840
bra-r.6
for
103856405
vvi-u.5
for
100252068
ppo-u.5
for
18103106
mtr-u.5
for
11441122
tae-r.2
for
123077985
hvu-r.1
for
123443337
ghi-r.1
for
121208565
ghi-r.1
for
107925143
bna-r.1
for
106430025
bna-r.1
for
106430178
sbi-r.1
for
8078781
sot-r.1
for
102579097
cit-r.1
for
102624541
bdi-r.1
for
100832436
nta-r.1
for
107784668
nta-r.1
for
107792835


Ortholog ID: 10195
Species cre cre ath gma gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_12g542000v5 CHLRE_12g541851v5 AT4G18460 LOC100813154 LOC100787782 LOC101245317 LOC4327697 LOC100282840 LOC103856405 LOC100252068 LOC18103106 LOC11441122 LOC123077985 LOC123443337 LOC121208565 LOC107925143 LOC106430025 LOC106430178 LOC8078781 LOC102579097 LOC102624541 LOC100832436 LOC107784668 LOC107792835
Function* uncharacterized protein uncharacterized protein D-Tyr-tRNA(Tyr) deacylase family protein D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase uncharacterized LOC101245317 uncharacterized LOC4327697 D-tyrosyl-tRNA D-aminoacyl-tRNA deacylase uncharacterized LOC100252068 uncharacterized LOC18103106 D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase D-aminoacyl-tRNA deacylase-like D-aminoacyl-tRNA deacylase-like D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase uncharacterized LOC102624541 D-aminoacyl-tRNA deacylase uncharacterized LOC107784668 uncharacterized LOC107792835
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00061 Fatty acid biosynthesis 4
ath01212 Fatty acid metabolism 4
ath00780 Biotin metabolism 3
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03040 Spliceosome 4
zma00220 Arginine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr01200 Carbon metabolism 3
mtr00330 Arginine and proline metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03015 mRNA surveillance pathway 3
tae03030 DNA replication 3
tae03410 Base excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
ghi00270 Cysteine and methionine metabolism 2
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 6
bna00520 Amino sugar and nucleotide sugar metabolism 6
bna01240 Biosynthesis of cofactors 6
bna01250 Biosynthesis of nucleotide sugars 6
bna00340 Histidine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 6
bna00520 Amino sugar and nucleotide sugar metabolism 6
bna01240 Biosynthesis of cofactors 6
bna01250 Biosynthesis of nucleotide sugars 6
bna00340 Histidine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 3
sot03010 Ribosome 2
sot04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719514 66055726 827578 100813154 100787782 101245317 4327697 100282840 103856405 100252068 18103106 11441122 123077985 123443337 121208565 107925143 106430025 106430178 8078781 102579097 102624541 100832436 107784668 107792835
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