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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g555050v5   uncharacterized protein 
 ath-u.5   MUS81   Restriction endonuclease, type II-like superfamily protein 
 gma-u.5   100798497   crossover junction endonuclease MUS81 
 sly-u.5   101256033   crossover junction endonuclease MUS81 
 osa-u.5   4325837   crossover junction endonuclease MUS81-like 
 zma-u.5   103650756   crossover junction endonuclease MUS81 
 zma-u.5   100216934   crossover junction endonuclease MUS81 
 vvi-u.5   100265347   crossover junction endonuclease MUS81 
 ppo-u.5   7462772   crossover junction endonuclease MUS81 
 mtr-u.5   11417347   crossover junction endonuclease MUS81 

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Top 50 coexpressed genes to CHLRE_12g555050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g555050v5 (cre-r.1 coexpression data)

CoexMap"5719728"


creCHLRE_12g555050v5 | Entrez gene ID : 5719728    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (4 genes)  IEA  
GO:0006308 [list] [network] DNA catabolic process  (4 genes)  IEA  
GO:0031573 [list] [network] mitotic intra-S DNA damage checkpoint signaling  (4 genes)  IEA  
GO:0000727 [list] [network] double-strand break repair via break-induced replication  (10 genes)  IEA  
GO CC
GO:0048476 [list] [network] Holliday junction resolvase complex  (1 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0048257 [list] [network] 3'-flap endonuclease activity  (1 genes)  IEA  
GO:0008821 [list] [network] crossover junction DNA endonuclease activity  (5 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042918924.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1  (predict for XP_042918924.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_042918924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g555050v5

.
ath-u.5
for
MUS81

.
gma-u.5
for
100798497

.
sly-u.5
for
101256033

.
osa-u.5
for
4325837

.
zma-u.5
for
103650756

.
zma-u.5
for
100216934

.
vvi-u.5
for
100265347

.
ppo-u.5
for
7462772

.
mtr-u.5
for
11417347

.


Ortholog ID: 5561
Species ath gma sly osa zma zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol MUS81 LOC100798497 LOC101256033 LOC4325837 LOC100216934 LOC103650756 LOC103839872 LOC100265347 LOC7462772 LOC11417347 LOC123078178 LOC123113047 LOC123443520 LOC123445478 LOC107918625 LOC107933257 LOC106381584 LOC106366117 CHLRE_12g555050v5 LOC8081327 LOC110433489 LOC102588124 LOC102619228 LOC100833052 LOC100844668 LOC107791766 LOC107830439
Function* Restriction endonuclease, type II-like superfamily protein crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 uncharacterized protein crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03460 Fanconi anemia pathway 2
ath04120 Ubiquitin mediated proteolysis 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03460 Fanconi anemia pathway 4
gma03440 Homologous recombination 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly04814 Motor proteins 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 4
osa03460 Fanconi anemia pathway 3
osa03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 4
ppo03460 Fanconi anemia pathway 3
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 3
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae04814 Motor proteins 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi01230 Biosynthesis of amino acids 2
bdi00190 Oxidative phosphorylation 2
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829211 100798497 101256033 4325837 100216934 103650756 103839872 100265347 7462772 11417347 123078178 123113047 123443520 123445478 107918625 107933257 106381584 106366117 5719728 8081327 110433489 102588124 102619228 100833052 100844668 107791766 107830439
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