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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g380151v5   uncharacterized protein 
 ath-u.5   AT1G77250   RING/FYVE/PHD-type zinc finger family protein 
 gma-u.5   100810450   PHD finger protein EHD3 
 gma-u.5   100795906   PHD finger protein EHD3 
 sly-u.5   101244658   PHD finger protein EHD3 
 osa-u.5   4344443   PHD finger protein EHD3-like 
 zma-u.5   103650916   PHD finger protein EHD3 
 zma-u.5   100383733   RING/FYVE/PHD-type zinc finger family protein 
 zma-u.5   100281389   uncharacterized LOC100281389 
 vvi-u.5   100247132   PHD finger protein EHD3 
 ppo-u.5   7466438   PHD finger protein EHD3 
 ppo-u.5   7460982   PHD finger protein EHD3 
 mtr-u.5   25489715   PHD finger protein EHD3 

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Top 50 coexpressed genes to CHLRE_08g380151v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g380151v5 (cre-r.1 coexpression data)

CoexMap"5719876"


creCHLRE_08g380151v5 | Entrez gene ID : 5719876    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 3 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042922250.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042922250.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_042922250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g380151v5

.
ath-u.5
for
AT1G77250

.
gma-u.5
for
100810450

.
gma-u.5
for
100795906

.
sly-u.5
for
101244658

.
osa-u.5
for
4344443

.
zma-u.5
for
103650916

.
zma-u.5
for
100383733

.
zma-u.5
for
100281389

.
vvi-u.5
for
100247132

.
ppo-u.5
for
7466438

.
ppo-u.5
for
7460982

.
mtr-u.5
for
25489715

.


Ortholog ID: 5433
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT1G77250 LOC100795906 LOC100786712 LOC101244658 LOC4344443 LOC100281389 LOC103650916 LOC103830573 LOC103832177 LOC100247132 LOC7460982 LOC7466438 LOC25489715 LOC123147651 LOC123165669 LOC123409698 LOC107960383 LOC107960385 LOC111213062 LOC106353486 CHLRE_08g380151v5 LOC8068510 LOC8063143 LOC102599910 LOC102629159 LOC100838909 LOC107768750 LOC107810514
Function* RING/FYVE/PHD-type zinc finger family protein PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like uncharacterized LOC100281389 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 uncharacterized protein PHD finger protein EHD3 PHD finger protein EHD3 uncharacterized LOC102599910 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu00061 Fatty acid biosynthesis 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844061 100795906 100786712 101244658 4344443 100281389 103650916 103830573 103832177 100247132 7460982 7466438 25489715 123147651 123165669 123409698 107960383 107960385 111213062 106353486 5719876 8068510 8063143 102599910 102629159 100838909 107768750 107810514
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