ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_08g379550v5	uncharacterized protein
ath-u.5	PHT4;1	phosphate transporter 4;1
ath-u.5	ANTR2	Major facilitator superfamily protein
gma-u.5	100793618	ascorbate transporter, chloroplastic
gma-u.5	100792104	sodium-dependent phosphate transport protein 1, chloroplastic
gma-u.5	100787020	sodium-dependent phosphate transport protein 1, chloroplastic
sly-u.5	101263257	ascorbate transporter, chloroplastic
sly-u.5	101266861	sodium-dependent phosphate transport protein 1, chloroplastic
osa-u.5	PHT4;4	probable anion transporter 4, chloroplastic
osa-u.5	PHT4;1	probable anion transporter 1, chloroplastic
zma-u.5	100281620	sialin
zma-u.5	100191676	uncharacterized LOC100191676
zma-u.5	103635996	probable anion transporter 4, chloroplastic
bra-r.6	103836924	ascorbate transporter, chloroplastic
bra-r.6	103858874	ascorbate transporter, chloroplastic
bra-r.6	103868018	sodium-dependent phosphate transport protein 1, chloroplastic
vvi-u.5	100255061	ascorbate transporter, chloroplastic
vvi-u.5	100246658	sodium-dependent phosphate transport protein 1, chloroplastic
ppo-u.5	7478542	probable anion transporter 1, chloroplastic
ppo-u.5	7481487	sodium-dependent phosphate transport protein 1, chloroplastic
ppo-u.5	7496975	ascorbate transporter, chloroplastic
mtr-u.5	11430128	ascorbate transporter, chloroplastic
mtr-u.5	25490824	sodium-dependent phosphate transport protein 1, chloroplastic
mtr-u.5	11443407	ascorbate transporter, chloroplastic
tae-r.2	123078202	probable anion transporter 1, chloroplastic
tae-r.2	123061125	probable anion transporter 1, chloroplastic
tae-r.2	123069715	probable anion transporter 1, chloroplastic
hvu-r.1	123443601	probable anion transporter 1, chloroplastic
hvu-r.1	123446803	probable anion transporter 4, chloroplastic
ghi-r.1	107887452	ascorbate transporter, chloroplastic
ghi-r.1	107928744	sodium-dependent phosphate transport protein 1, chloroplastic
ghi-r.1	107952772	ascorbate transporter, chloroplastic
bna-r.1	111215709	sodium-dependent phosphate transport protein 1, chloroplastic
bna-r.1	106384139	ascorbate transporter, chloroplastic
bna-r.1	106434099	sodium-dependent phosphate transport protein 1, chloroplastic
sbi-r.1	8075480	probable anion transporter 4, chloroplastic
sbi-r.1	8078115	probable anion transporter 1, chloroplastic
sot-r.1	102598682	sodium-dependent phosphate transport protein 1, chloroplastic
sot-r.1	102599205	ascorbate transporter, chloroplastic
cit-r.1	102613898	sodium-dependent phosphate transport protein 1, chloroplastic
cit-r.1	102630913	ascorbate transporter, chloroplastic
cit-r.1	127901166	ascorbate transporter, chloroplastic-like
bdi-r.1	100842035	probable anion transporter 1, chloroplastic
bdi-r.1	100832197	probable anion transporter 4, chloroplastic
nta-r.1	107827552	ascorbate transporter, chloroplastic
nta-r.1	107790630	sodium-dependent phosphate transport protein 1, chloroplastic-like
nta-r.1	107787093	ascorbate transporter, chloroplastic

Top 50 coexpressed genes to CHLRE_08g379550v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_08g379550v5 (cre-r.1 coexpression data)

CoexMap"5719884"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(461 genes)

IEA

GO CC

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(567 genes)

IEA

Protein

XP_042922238.1 [sequence] [blastp]
XP_042922239.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, E.R. 4, chlo 1	(predict for XP_042922238.1)
chlo 4, plas 4, E.R. 1	(predict for XP_042922239.1)

Subcellular
localization
TargetP

chlo 7	(predict for XP_042922238.1)
mito 7	(predict for XP_042922239.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g379550v5	ath-u.5 for PHT4;1	ath-u.5 for ANTR2	gma-u.5 for 100793618	gma-u.5 for 100792104	gma-u.5 for 100787020	sly-u.5 for 101263257	sly-u.5 for 101266861	osa-u.5 for PHT4;4	osa-u.5 for PHT4;1	zma-u.5 for 100281620	zma-u.5 for 100191676	zma-u.5 for 103635996	bra-r.6 for 103836924	bra-r.6 for 103858874	bra-r.6 for 103868018	vvi-u.5 for 100255061	vvi-u.5 for 100246658	ppo-u.5 for 7478542	ppo-u.5 for 7481487	ppo-u.5 for 7496975	mtr-u.5 for 11430128	mtr-u.5 for 25490824	mtr-u.5 for 11443407	tae-r.2 for 123078202	tae-r.2 for 123061125	tae-r.2 for 123069715	hvu-r.1 for 123443601	hvu-r.1 for 123446803	ghi-r.1 for 107887452	ghi-r.1 for 107928744	ghi-r.1 for 107952772	bna-r.1 for 111215709	bna-r.1 for 106384139	bna-r.1 for 106434099	sbi-r.1 for 8075480	sbi-r.1 for 8078115	sot-r.1 for 102598682	sot-r.1 for 102599205	cit-r.1 for 102613898	cit-r.1 for 102630913	cit-r.1 for 127901166	bdi-r.1 for 100842035	bdi-r.1 for 100832197	nta-r.1 for 107827552	nta-r.1 for 107790630	nta-r.1 for 107787093

Ortholog

Ortholog ID: 2453

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_08g379550v5

PHT4;1

ANTR2

PHT4;4

PHT4;1

Function^*

uncharacterized protein

phosphate transporter 4;1

Major facilitator superfamily protein

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

sialin

uncharacterized LOC100191676

probable anion transporter 4, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 1, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

ascorbate transporter, chloroplastic-like

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic-like

ascorbate transporter, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00620	Pyruvate metabolism	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	3
gma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	3
bra00500	Starch and sucrose metabolism	3
bra00030	Pentose phosphate pathway	2
bra00052	Galactose metabolism	2
bra00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00196	Photosynthesis - antenna proteins	8
ppo00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	4
mtr00500	Starch and sucrose metabolism	3
mtr01200	Carbon metabolism	3
mtr01240	Biosynthesis of cofactors	2
mtr00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3
tae04016	MAPK signaling pathway - plant	2
tae04070	Phosphatidylinositol signaling system	2
tae04075	Plant hormone signal transduction	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3
tae00196	Photosynthesis - antenna proteins	2
tae04016	MAPK signaling pathway - plant	2
tae04070	Phosphatidylinositol signaling system	2
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	2
bna04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	3
bdi00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	3
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

5719884

817515

827908

100793618

100792104

100784401

101263257

101266861

4347913

4326905

100281620

100191676

103635996

103836924

103858874

103868018

100255061

100246658

7478542

7481487

7496975

11430128

25490824

11443407

123069715

123090477

123095567

123443601

123446803

107887452

107952772

107911574

106384139

106434099

106451518

8075480

8078115

102598682

102599205

102613898

102630913

127901166

100842035

100832197

107827552

107790630

107787093

The preparation time of this page was 0.1 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	3	2	2	3	3	2	3	3	3	2	3	3	2	2	3	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g379550v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g379550v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**