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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g376350v5   uncharacterized protein 
 ath-u.5   ASF1B   anti- silencing function 1b 
 ath-u.5   SGA2   ASF1 like histone chaperone 
 gma-u.5   100801694   histone chaperone ASF1B 
 gma-u.5   100305970   uncharacterized LOC100305970 
 sly-u.5   101263022   probable histone chaperone ASF1A 
 sly-u.5   101254449   probable histone chaperone ASF1A 
 sly-u.5   101264476   histone chaperone ASF1B 
 osa-u.5   4339550   probable histone chaperone ASF1A 
 zma-u.5   103635303   histone chaperone ASF1B 
 zma-u.5   100283736   uncharacterized LOC100283736 
 vvi-u.5   100266239   histone chaperone ASF1B 
 vvi-u.5   100244498   histone chaperone ASF1B 
 ppo-u.5   7487360   histone chaperone ASF1B 
 ppo-u.5   18099430   probable histone chaperone ASF1A 
 mtr-u.5   11429307   histone chaperone ASF1B 

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Top 50 coexpressed genes to CHLRE_08g376350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g376350v5 (cre-r.1 coexpression data)

CoexMap"5719938"


creCHLRE_08g376350v5 | Entrez gene ID : 5719938      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 3 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006335 [list] [network] DNA replication-dependent chromatin assembly  (2 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (34 genes)  IEA  
Protein XP_042922178.1 [sequence] [blastp]
XP_042922179.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_042922178.1)
chlo 8,  vacu 1  (predict for XP_042922179.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_042922178.1)
scret 8  (predict for XP_042922179.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g376350v5

.
ath-u.5
for
ASF1B

.
ath-u.5
for
SGA2

.
gma-u.5
for
100801694

.
gma-u.5
for
100305970

.
sly-u.5
for
101263022

.
sly-u.5
for
101254449

.
sly-u.5
for
101264476

.
osa-u.5
for
4339550

.
zma-u.5
for
103635303

.
zma-u.5
for
100283736

.
vvi-u.5
for
100266239

.
vvi-u.5
for
100244498

.
ppo-u.5
for
7487360

.
ppo-u.5
for
18099430

.
mtr-u.5
for
11429307

.


Ortholog ID: 3844
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol SGA2 ASF1B LOC100305970 LOC100801694 LOC101254449 LOC101264476 LOC4339550 LOC100283736 LOC103635303 LOC103852330 LOC103831126 LOC100244498 LOC100266239 LOC7487360 LOC18099430 LOC11429307 LOC123078956 LOC123144502 LOC123444131 LOC123449521 LOC107912764 LOC107912907 LOC106366736 LOC106405784 CHLRE_08g376350v5 LOC8063556 LOC102599244 LOC102600796 LOC102619413 LOC102621733 LOC100834908 LOC107825459 LOC107770991
Function* ASF1 like histone chaperone anti- silencing function 1b uncharacterized LOC100305970 histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B probable histone chaperone ASF1A uncharacterized LOC100283736 histone chaperone ASF1B probable histone chaperone ASF1A probable histone chaperone ASF1A histone chaperone ASF1B histone chaperone ASF1B histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B histone chaperone ASF1B probable histone chaperone ASF1A probable histone chaperone ASF1A uncharacterized protein histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B probable histone chaperone ASF1A histone chaperone ASF1B probable histone chaperone ASF1A putative histone chaperone ASF1A histone chaperone ASF1B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
ath03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03410 Base excision repair 6
gma03420 Nucleotide excision repair 6
gma03430 Mismatch repair 6
gma03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03018 RNA degradation 3
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03420 Nucleotide excision repair 4
zma03430 Mismatch repair 4
zma03410 Base excision repair 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03030 DNA replication 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03420 Nucleotide excision repair 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03040 Spliceosome 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 8
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842992 833791 100305970 100801694 101254449 101264476 4339550 100283736 103635303 103852330 103831126 100244498 100266239 7487360 18099430 11429307 123078956 123144502 123444131 123449521 107912764 107912907 106366736 106405784 5719938 8063556 102599244 102600796 102619413 102621733 100834908 107825459 107770991
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