Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g387400v5   uncharacterized protein 
 ath-u.5   REV3   recovery protein 3 
 gma-u.5   100777934   DNA polymerase zeta catalytic subunit 
 sly-u.5   101266467   DNA polymerase zeta catalytic subunit 
 osa-u.5   4344230   DNA polymerase zeta catalytic subunit 
 zma-u.5   103633541   DNA polymerase zeta catalytic subunit 
 vvi-u.5   100263126   DNA polymerase zeta catalytic subunit 
 ppo-u.5   7473291   DNA polymerase zeta catalytic subunit 
 mtr-u.5   11431309   DNA polymerase zeta catalytic subunit 

close


Top 50 coexpressed genes to CHLRE_09g387400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_09g387400v5 (cre-r.1 coexpression data)

CoexMap"5720008"


creCHLRE_09g387400v5 | Entrez gene ID : 5720008    
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (10 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0016035 [list] [network] zeta DNA polymerase complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (22 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (1539 genes)  IEA  
Protein XP_042921057.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_042921057.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for XP_042921057.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g387400v5

.
ath-u.5
for
REV3

.
gma-u.5
for
100777934

.
sly-u.5
for
101266467

.
osa-u.5
for
4344230

.
zma-u.5
for
103633541

.
vvi-u.5
for
100263126

.
ppo-u.5
for
7473291

.
mtr-u.5
for
11431309

.


Ortholog ID: 11795
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol REV3 LOC100777934 LOC101266467 LOC4344230 LOC103633541 LOC103831023 LOC100263126 LOC7473291 LOC11431309 LOC123051636 LOC123424791 LOC107894311 LOC107899100 LOC106410865 LOC111213528 CHLRE_09g387400v5 LOC8074417 LOC102591871 LOC102622531 LOC100843632 LOC107831863 LOC107768024
Function* recovery protein 3 DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit-like DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit-like DNA polymerase zeta catalytic subunit uncharacterized protein DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi04712 Circadian rhythm - plant 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi04712 Circadian rhythm - plant 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 9
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03450 Non-homologous end-joining 2
nta03460 Fanconi anemia pathway 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843071 100777934 101266467 4344230 103633541 103831023 100263126 7473291 11431309 123051636 123424791 107894311 107899100 106410865 111213528 5720008 8074417 102591871 102622531 100843632 107831863 107768024
The preparation time of this page was 0.1 [sec].