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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g393600v5   uncharacterized protein 
 ath-u.5   SLD5   DNA replication protein-like protein 
 gma-u.5   100784291   DNA replication complex GINS protein SLD5 
 sly-u.5   101252143   DNA replication complex GINS protein SLD5 
 osa-u.5   4337776   DNA replication complex GINS protein SLD5 
 ppo-u.5   7471100   DNA replication complex GINS protein SLD5 
 mtr-u.5   25486583   DNA replication complex GINS protein SLD5 

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Top 50 coexpressed genes to CHLRE_09g393600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g393600v5 (cre-r.1 coexpression data)

CoexMap"5720119"


creCHLRE_09g393600v5 | Entrez gene ID : 5720119    
Species cre ath gma sly osa ppo mtr ghi cit vvi hvu bdi sot bra sbi tae nta zma bna
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000727 [list] [network] double-strand break repair via break-induced replication  (10 genes)  IEA  
GO:0006261 [list] [network] DNA-templated DNA replication  (66 genes)  IEA  
GO CC
GO:0000811 [list] [network] GINS complex  (4 genes)  IEA  
GO MF
Protein XP_042920945.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_042920945.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042920945.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g393600v5

.
ath-u.5
for
SLD5

.
gma-u.5
for
100784291

.
sly-u.5
for
101252143

.
osa-u.5
for
4337776

.
ppo-u.5
for
7471100

.
mtr-u.5
for
25486583

.


Ortholog ID: 7370
Species ath gma sly osa zma bra ppo mtr tae tae hvu ghi ghi cre sbi sot cit bdi nta nta
Symbol SLD5 LOC100784291 LOC101252143 LOC4337776 LOC100193079 LOC103875012 LOC7471100 LOC25486583 LOC123071800 LOC123062933 LOC123445112 LOC107896602 LOC107916232 CHLRE_09g393600v5 LOC8068213 LOC102596612 LOC102615271 LOC100825702 LOC107828148 LOC107805638
Function* DNA replication protein-like protein DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 uncharacterized LOC100193079 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 uncharacterized protein DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5-like DNA replication complex GINS protein SLD5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma03440 Homologous recombination 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
osa03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 8
zma03420 Nucleotide excision repair 3
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 10
ppo03420 Nucleotide excision repair 3
ppo03440 Homologous recombination 3
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae04626 Plant-pathogen interaction 3
tae03010 Ribosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03082 ATP-dependent chromatin remodeling 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834960 100784291 101252143 4337776 100193079 103875012 7471100 25486583 123071800 123062933 123445112 107896602 107916232 5720119 8068213 102596612 102615271 100825702 107828148 107805638
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