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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g393950v5   uncharacterized protein 
 ath-u.5   AT3G02450   cell division protein ftsH 
 gma-u.5   100814196   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 gma-u.5   100802233   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 sly-u.5   101258831   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 osa-u.5   4336096   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 zma-u.5   103646347   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 vvi-u.5   100249724   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ppo-u.5   7468374   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ppo-u.5   112326557   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like 
 mtr-u.5   25495520   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 

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Top 50 coexpressed genes to CHLRE_09g393950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g393950v5 (cre-r.1 coexpression data)

CoexMap"5720126"


creCHLRE_09g393950v5 | Entrez gene ID : 5720126    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (404 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (62 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (22 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042920934.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  golg 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_042920934.1)
Subcellular
localization
TargetP
other 9,  chlo 3  (predict for XP_042920934.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g393950v5

.
ath-u.5
for
AT3G02450

.
gma-u.5
for
100814196

.
gma-u.5
for
100802233

.
sly-u.5
for
101258831

.
osa-u.5
for
4336096

.
zma-u.5
for
103646347

.
vvi-u.5
for
100249724

.
ppo-u.5
for
7468374

.
ppo-u.5
for
112326557

.
mtr-u.5
for
25495520

.


Ortholog ID: 8945
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G02450 LOC100814196 LOC100802233 LOC101258831 LOC4336096 LOC103646347 LOC103870914 LOC100249724 LOC7468374 LOC112326557 LOC25495520 LOC123053579 LOC123045707 LOC123426956 LOC107954818 LOC107962248 LOC106382863 LOC125587574 CHLRE_09g393950v5 LOC110436353 LOC102599709 LOC102590643 LOC102607258 LOC104585358 LOC107792682 LOC107785289
Function* cell division protein ftsH probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic uncharacterized protein probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03040 Spliceosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821139 100814196 100802233 101258831 4336096 103646347 103870914 100249724 7468374 112326557 25495520 123053579 123045707 123426956 107954818 107962248 106382863 125587574 5720126 110436353 102599709 102590643 102607258 104585358 107792682 107785289
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