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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g398150v5   uncharacterized protein 
 ath-u.5   EYA   eyes absent-like protein 
 gma-u.5   100799315   eyes absent homolog 4-like 
 gma-u.5   100791661   eyes absent homolog 
 sly-u.5   101265052   eyes absent homolog 
 osa-u.5   4339886   eyes absent homolog 
 zma-u.5   100283254   uncharacterized LOC100283254 
 vvi-u.5   100247200   eyes absent homolog 
 ppo-u.5   18094184   eyes absent homolog 
 mtr-u.5   11413431   eyes absent homolog 

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Top 50 coexpressed genes to CHLRE_09g398150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g398150v5 (cre-r.1 coexpression data)

CoexMap"5720201"


creCHLRE_09g398150v5 | Entrez gene ID : 5720201    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045739 [list] [network] positive regulation of DNA repair  (2 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (9 genes)  IEA  
GO:0048856 [list] [network] anatomical structure development  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004725 [list] [network] protein tyrosine phosphatase activity  (11 genes)  IEA  
Protein XP_042920863.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  plas 2,  vacu 2,  nucl_plas 2,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_042920863.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_042920863.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g398150v5

.
ath-u.5
for
EYA

.
gma-u.5
for
100799315

.
gma-u.5
for
100791661

.
sly-u.5
for
101265052

.
osa-u.5
for
4339886

.
zma-u.5
for
100283254

.
vvi-u.5
for
100247200

.
ppo-u.5
for
18094184

.
mtr-u.5
for
11413431

.


Ortholog ID: 10022
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EYA LOC100799315 LOC100791661 LOC101265052 LOC4339886 LOC100283254 LOC103857565 LOC100247200 LOC18094184 LOC11413431 LOC123088430 LOC123150196 LOC123407865 LOC121224299 LOC107946739 LOC106437850 LOC106402538 CHLRE_09g398150v5 LOC8068174 LOC102592026 LOC102617879 LOC100840344 LOC107821111 LOC107797114
Function* eyes absent-like protein eyes absent homolog 4-like eyes absent homolog eyes absent homolog eyes absent homolog uncharacterized LOC100283254 eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog eyes absent homolog uncharacterized protein eyes absent homolog 4 eyes absent homolog 2 eyes absent homolog eyes absent homolog 2 protein phosphatase EYA protein phosphatase EYA-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03010 Ribosome 3
sot04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818099 100799315 100791661 101265052 4339886 100283254 103857565 100247200 18094184 11413431 123088430 123150196 123407865 121224299 107946739 106437850 106402538 5720201 8068174 102592026 102617879 100840344 107821111 107797114
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