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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g145800v5   uncharacterized protein 
 ath-u.5   c-NAD-MDH1   Lactate/malate dehydrogenase family protein 
 ath-u.5   c-NAD-MDH2   Lactate/malate dehydrogenase family protein 
 ath-u.5   c-NAD-MDH3   Lactate/malate dehydrogenase family protein 
 gma-u.5   547963   cytosolic malate dehydrogenase 
 gma-u.5   100811402   malate dehydrogenase, cytoplasmic-like 
 gma-u.5   100783188   malate dehydrogenase, cytoplasmic 
 sly-u.5   101253131   malate dehydrogenase 
 sly-u.5   cMDH   cytosolic malate dehydrogenase 
 osa-u.5   4348905   malate dehydrogenase, cytoplasmic-like 
 osa-u.5   4336595   malate dehydrogenase, cytoplasmic-like 
 zma-u.5   542598   malate dehydrogenase 5 
 zma-u.5   100280767   malate dehydrogenase, cytoplasmic 
 vvi-u.5   100256452   malate dehydrogenase 
 vvi-u.5   100253273   malate dehydrogenase, cytoplasmic 
 vvi-u.5   100248145   malate dehydrogenase, cytoplasmic 
 ppo-u.5   7467536   malate dehydrogenase 
 ppo-u.5   7453937   malate dehydrogenase, cytoplasmic 
 ppo-u.5   18102471   malate dehydrogenase 
 mtr-u.5   11436578   malate dehydrogenase, cytoplasmic 
 mtr-u.5   11430390   malate dehydrogenase, cytoplasmic 
 mtr-u.5   25484448   malate dehydrogenase 

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Top 50 coexpressed genes to CHLRE_02g145800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g145800v5 (cre-r.1 coexpression data)

CoexMap"5720512"


creCHLRE_02g145800v5 | Entrez gene ID : 5720512      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 2 2 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00020 [list] [network] Citrate cycle (TCA cycle) (33 genes)
cre00270 [list] [network] Cysteine and methionine metabolism (53 genes)
cre00566 [list] [network] Sulfoquinovose metabolism (7 genes)
cre00620 [list] [network] Pyruvate metabolism (51 genes)
cre00630 [list] [network] Glyoxylate and dicarboxylate metabolism (43 genes)
cre00710 [list] [network] Carbon fixation by Calvin cycle (44 genes)
cre01200 [list] [network] Carbon metabolism (143 genes)
GO BP
GO:0006107 [list] [network] oxaloacetate metabolic process  (4 genes)  IEA  
GO:0006108 [list] [network] malate metabolic process  (11 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (24 genes)  IEA  
GO CC
GO MF
GO:0030060 [list] [network] L-malate dehydrogenase (NAD+) activity  (5 genes)  IEA  
Protein XP_042927723.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_042927723.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_042927723.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g145800v5

.
ath-u.5
for
c-NAD-MDH1

.
ath-u.5
for
c-NAD-MDH2

.
ath-u.5
for
c-NAD-MDH3

.
gma-u.5
for
547963

.
gma-u.5
for
100811402

.
gma-u.5
for
100783188

.
sly-u.5
for
101253131

.
sly-u.5
for
cMDH

.
osa-u.5
for
4348905

.
osa-u.5
for
4336595

.
zma-u.5
for
542598

.
zma-u.5
for
100280767

.
vvi-u.5
for
100256452

.
vvi-u.5
for
100253273

.
vvi-u.5
for
100248145

.
ppo-u.5
for
7467536

.
ppo-u.5
for
7453937

.
ppo-u.5
for
18102471

.
mtr-u.5
for
11436578

.
mtr-u.5
for
11430390

.
mtr-u.5
for
25484448

.


Ortholog ID: 2507
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu bna bna cre sbi sot sot cit cit bdi nta nta
Symbol c-NAD-MDH2 c-NAD-MDH1 LOC100783188 LOC547963 LOC101253131 cMDH LOC4336595 LOC4348905 LOC542598 LOC100280767 LOC103839246 LOC103836575 LOC100248145 LOC100253273 LOC7467536 LOC18102471 LOC11436578 LOC25484448 LOC123181082 LOC543356 LOC123431137 LOC106432835 LOC106371475 CHLRE_02g145800v5 LOC8070482 LOC102585937 LOC102577663 LOC102577998 LOC102615934 LOC100841049 LOC107823900 LOC107763505
Function* Lactate/malate dehydrogenase family protein Lactate/malate dehydrogenase family protein malate dehydrogenase, cytoplasmic cytosolic malate dehydrogenase malate dehydrogenase cytosolic malate dehydrogenase malate dehydrogenase, cytoplasmic-like malate dehydrogenase, cytoplasmic-like malate dehydrogenase 5 malate dehydrogenase, cytoplasmic malate dehydrogenase 1, cytoplasmic malate dehydrogenase 2, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase malate dehydrogenase malate dehydrogenase, cytoplasmic malate dehydrogenase malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase 3, cytoplasmic malate dehydrogenase 3, cytoplasmic uncharacterized protein malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic-like malate dehydrogenase-like protein malate dehydrogenase malate dehydrogenase, cytoplasmic-like malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 9
ath01200 Carbon metabolism 9
ath00710 Carbon fixation by Calvin cycle 5
ath01230 Biosynthesis of amino acids 5
ath00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
ath01200 Carbon metabolism 5
ath00710 Carbon fixation by Calvin cycle 3
ath01230 Biosynthesis of amino acids 3
ath00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 11
gma01200 Carbon metabolism 11
gma01230 Biosynthesis of amino acids 8
gma00010 Glycolysis / Gluconeogenesis 8
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 8
sly00020 Citrate cycle (TCA cycle) 4
sly00620 Pyruvate metabolism 4
sly01200 Carbon metabolism 4
sly04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
osa00565 Ether lipid metabolism 2
osa04144 Endocytosis 2
osa00500 Starch and sucrose metabolism 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 12
osa00010 Glycolysis / Gluconeogenesis 11
osa01230 Biosynthesis of amino acids 10
osa00710 Carbon fixation by Calvin cycle 8
osa00030 Pentose phosphate pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 11
zma01230 Biosynthesis of amino acids 8
zma00710 Carbon fixation by Calvin cycle 8
zma00010 Glycolysis / Gluconeogenesis 7
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00270 Cysteine and methionine metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma00190 Oxidative phosphorylation 2
zma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04145 Phagosome 6
bra04142 Lysosome 5
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00190 Oxidative phosphorylation 6
bra00010 Glycolysis / Gluconeogenesis 4
bra00710 Carbon fixation by Calvin cycle 4
bra00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00710 Carbon fixation by Calvin cycle 6
vvi01230 Biosynthesis of amino acids 6
vvi00020 Citrate cycle (TCA cycle) 4
vvi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00710 Carbon fixation by Calvin cycle 6
vvi01230 Biosynthesis of amino acids 6
vvi00010 Glycolysis / Gluconeogenesis 5
vvi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 10
ppo01200 Carbon metabolism 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00710 Carbon fixation by Calvin cycle 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00270 Cysteine and methionine metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 12
mtr01230 Biosynthesis of amino acids 10
mtr00710 Carbon fixation by Calvin cycle 10
mtr00010 Glycolysis / Gluconeogenesis 7
mtr00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae01200 Carbon metabolism 4
tae00270 Cysteine and methionine metabolism 4
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00100 Steroid biosynthesis 4
tae01200 Carbon metabolism 4
tae00270 Cysteine and methionine metabolism 4
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 6
hvu00190 Oxidative phosphorylation 6
hvu00010 Glycolysis / Gluconeogenesis 5
hvu00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 3
bna00480 Glutathione metabolism 3
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 3
bna00480 Glutathione metabolism 3
bna00564 Glycerophospholipid metabolism 2
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 9
cre00630 Glyoxylate and dicarboxylate metabolism 6
cre00020 Citrate cycle (TCA cycle) 6
cre00620 Pyruvate metabolism 4
cre00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 11
sbi00010 Glycolysis / Gluconeogenesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00710 Carbon fixation by Calvin cycle 7
sbi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 10
sot01230 Biosynthesis of amino acids 7
sot00710 Carbon fixation by Calvin cycle 6
sot00620 Pyruvate metabolism 5
sot00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 4
cit00010 Glycolysis / Gluconeogenesis 3
cit00710 Carbon fixation by Calvin cycle 3
cit00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00020 Citrate cycle (TCA cycle) 6
bdi00190 Oxidative phosphorylation 5
bdi00620 Pyruvate metabolism 4
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 10
nta01200 Carbon metabolism 8
nta00710 Carbon fixation by Calvin cycle 6
nta00620 Pyruvate metabolism 6
nta00010 Glycolysis / Gluconeogenesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834351 839527 100783188 547963 101253131 778330 4336595 4348905 542598 100280767 103839246 103836575 100248145 100253273 7467536 18102471 11436578 25484448 123181082 543356 123431137 106432835 106371475 5720512 8070482 102585937 102577663 102577998 102615934 100841049 107823900 107763505
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