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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g146950v5   uncharacterized protein 
 ath-u.5   DBR1   debranching enzyme 1 
 gma-u.5   100812726   lariat debranching enzyme 
 sly-u.5   101262023   lariat debranching enzyme 
 osa-u.5   4333963   lariat debranching enzyme-like 
 zma-u.5   100285583   uncharacterized LOC100285583 
 vvi-u.5   100264324   lariat debranching enzyme 
 ppo-u.5   7458440   lariat debranching enzyme 
 mtr-u.5   11433508   lariat debranching enzyme 

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Top 50 coexpressed genes to CHLRE_02g146950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g146950v5 (cre-r.1 coexpression data)

CoexMap"5720530"


creCHLRE_02g146950v5 | Entrez gene ID : 5720530    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0008419 [list] [network] RNA lariat debranching enzyme activity  (1 genes)  IEA  
Protein XP_042927702.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  pero 2,  chlo_mito 2  (predict for XP_042927702.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042927702.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g146950v5

.
ath-u.5
for
DBR1

.
gma-u.5
for
100812726

.
sly-u.5
for
101262023

.
osa-u.5
for
4333963

.
zma-u.5
for
100285583

.
vvi-u.5
for
100264324

.
ppo-u.5
for
7458440

.
mtr-u.5
for
11433508

.


Ortholog ID: 10239
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol DBR1 LOC100812726 LOC101262023 LOC4333963 LOC100285583 LOC103862082 LOC100264324 LOC7458440 LOC11433508 LOC123087029 LOC123090931 LOC123447631 LOC107911043 LOC107930812 LOC106386230 LOC106420285 CHLRE_02g146950v5 LOC110431703 LOC102584487 LOC102627004 LOC100845942 LOC107809977 LOC107788506
Function* debranching enzyme 1 lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme-like uncharacterized LOC100285583 lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme-like uncharacterized protein lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 2
osa00562 Inositol phosphate metabolism 2
osa04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03010 Ribosome 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829305 100812726 101262023 4333963 100285583 103862082 100264324 7458440 11433508 123087029 123090931 123447631 107911043 107930812 106386230 106420285 5720530 110431703 102584487 102627004 100845942 107809977 107788506
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