ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G05260	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT1G54870	NAD(P)-binding Rossmann-fold superfamily protein
gma-u.5	PM34	seed maturation protein PM34
gma-u.5	100807147	glucose and ribitol dehydrogenase homolog 1-like
gma-u.5	100809384	glucose and ribitol dehydrogenase-like
sly-u.5	101262257	NADPH-dependent aldehyde reductase 1, chloroplastic
osa-u.5	4337759	glucose and ribitol dehydrogenase homolog
zma-u.5	100272498	uncharacterized LOC100272498
bra-r.6	103844522	NADPH-dependent aldehyde reductase 1, chloroplastic
bra-r.6	103870838	glucose and ribitol dehydrogenase homolog 2
vvi-u.5	100256303	glucose and ribitol dehydrogenase
ppo-u.5	7471498	glucose and ribitol dehydrogenase
tae-r.2	123087893	glucose and ribitol dehydrogenase homolog
tae-r.2	123180370	glucose and ribitol dehydrogenase homolog
tae-r.2	123190733	glucose and ribitol dehydrogenase homolog
hvu-r.1	123424293	glucose and ribitol dehydrogenase homolog
ghi-r.1	107899107	NADPH-dependent aldehyde reductase 1, chloroplastic
ghi-r.1	107894345	NADPH-dependent aldehyde reductase 1, chloroplastic
bna-r.1	111212037	NADPH-dependent aldehyde reductase 1, chloroplastic
bna-r.1	106453036	glucose and ribitol dehydrogenase homolog 2
bna-r.1	106392387	NADPH-dependent aldehyde reductase 1, chloroplastic
cit-r.1	102629449	NADPH-dependent aldehyde reductase 1, chloroplastic-like
bdi-r.1	100836454	glucose and ribitol dehydrogenase homolog

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(596 genes)

IEA

Protein

XP_042920845.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1, chlo_mito 1, cysk_nucl 1

(predict for XP_042920845.1)

Subcellular
localization
TargetP

other 7

(predict for XP_042920845.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G05260	ath-u.5 for AT1G54870	gma-u.5 for PM34	gma-u.5 for 100807147	gma-u.5 for 100809384	sly-u.5 for 101262257	osa-u.5 for 4337759	zma-u.5 for 100272498	bra-r.6 for 103844522	bra-r.6 for 103870838	vvi-u.5 for 100256303	ppo-u.5 for 7471498	tae-r.2 for 123087893	tae-r.2 for 123180370	tae-r.2 for 123190733	hvu-r.1 for 123424293	ghi-r.1 for 107899107	ghi-r.1 for 107894345	bna-r.1 for 111212037	bna-r.1 for 106453036	bna-r.1 for 106392387	cit-r.1 for 102629449	bdi-r.1 for 100836454

Ortholog

Ortholog ID: 5286

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

tae

hvu

ghi

bna

cit

bdi

Symbol

PM34

Function^*

NAD(P)-binding Rossmann-fold superfamily protein

seed maturation protein PM34

glucose and ribitol dehydrogenase-like

NADPH-dependent aldehyde reductase 1, chloroplastic

glucose and ribitol dehydrogenase homolog

uncharacterized LOC100272498

NADPH-dependent aldehyde reductase 1, chloroplastic

glucose and ribitol dehydrogenase homolog 2

glucose and ribitol dehydrogenase

glucose and ribitol dehydrogenase homolog

NADPH-dependent aldehyde reductase 1, chloroplastic

glucose and ribitol dehydrogenase homolog 2

NADPH-dependent aldehyde reductase 1, chloroplastic

NADPH-dependent aldehyde reductase 1, chloroplastic-like

glucose and ribitol dehydrogenase homolog

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00591	Linoleic acid metabolism	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra01200	Carbon metabolism	3
bra00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra00640	Propanoate metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi01200	Carbon metabolism	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00670	One carbon pool by folate	3
tae04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	2
tae00670	One carbon pool by folate	2
tae04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00020	Citrate cycle (TCA cycle)	2
bna00190	Oxidative phosphorylation	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00910	Nitrogen metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

819690

841926

547554

100809384

100819809

101262257

4337759

100272498

103844522

103870838

100256303

7471498

123087893

123180370

123190733

123424293

107899107

107894345

111212037

106453036

106392387

102629449

100836454

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G05260 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G05260 (ath-u.5 coexpression data)


Species	ath	gma	sly	osa	zma	bra	vvi	ppo	tae	hvu	ghi	bna	cit	bdi	nta	cre	sbi	sot	mtr
Paralog	2	3	1	1	1	2	1	1	3	1	2	3	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G05260 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G05260 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**