ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g278800v5	uncharacterized protein
ath-u.5	AT5G19750	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
gma-u.5	100790392	protein sym-1
sly-u.5	101260803	protein sym-1
osa-u.5	4349678	protein SYM1
osa-u.5	107276049	protein SYM1
zma-u.5	100384529	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
bra-r.6	103856391	protein sym-1
bra-r.6	103845727	protein sym-1
vvi-u.5	100243066	protein sym-1
ppo-u.5	7458901	protein sym-1
ppo-u.5	7495675	protein sym-1
mtr-u.5	11415018	protein sym-1
tae-r.2	123103106	protein sym-1
tae-r.2	123111296	protein sym-1
tae-r.2	123120436	protein sym-1
hvu-r.1	123451872	protein sym-1
ghi-r.1	121220171	protein sym-1
ghi-r.1	107926229	protein sym-1
bna-r.1	106434386	protein sym-1
bna-r.1	106386747	protein sym-1-like
bna-r.1	106371790	protein sym-1
sbi-r.1	8083056	protein sym-1
sot-r.1	102598074	protein sym-1
cit-r.1	102617207	protein sym-1
bdi-r.1	100826173	protein sym-1
nta-r.1	107801599	protein sym-1
nta-r.1	107765128	protein sym-1

Annotation

functional annotation

KEGG

cre04146 [list] [network] Peroxisome (43 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane	(1543 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(2907 genes)	IEA

GO MF

Protein

XP_001695296.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1

(predict for XP_001695296.1)

Subcellular
localization
TargetP

mito 6, chlo 5

(predict for XP_001695296.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g278800v5	ath-u.5 for AT5G19750	gma-u.5 for 100790392	sly-u.5 for 101260803	osa-u.5 for 4349678	osa-u.5 for 107276049	zma-u.5 for 100384529	bra-r.6 for 103856391	bra-r.6 for 103845727	vvi-u.5 for 100243066	ppo-u.5 for 7458901	ppo-u.5 for 7495675	mtr-u.5 for 11415018	tae-r.2 for 123103106	tae-r.2 for 123111296	tae-r.2 for 123120436	hvu-r.1 for 123451872	ghi-r.1 for 121220171	ghi-r.1 for 107926229	bna-r.1 for 106434386	bna-r.1 for 106386747	bna-r.1 for 106371790	sbi-r.1 for 8083056	sot-r.1 for 102598074	cit-r.1 for 102617207	bdi-r.1 for 100826173	nta-r.1 for 107801599	nta-r.1 for 107765128

Ortholog

Ortholog ID: 7730

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

protein sym-1

protein SYM1

Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

protein sym-1

protein sym-1-like

protein sym-1

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00020	Citrate cycle (TCA cycle)	8
cre01200	Carbon metabolism	8
cre00190	Oxidative phosphorylation	4
cre00640	Propanoate metabolism	2
cre00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00340	Histidine metabolism	2
ath00350	Tyrosine metabolism	2
ath00360	Phenylalanine metabolism	2
ath00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ath00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	7
gma00061	Fatty acid biosynthesis	6
gma01200	Carbon metabolism	6
gma01212	Fatty acid metabolism	6
gma00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00240	Pyrimidine metabolism	2
bra01232	Nucleotide metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03420	Nucleotide excision repair	3
vvi03010	Ribosome	3
vvi03020	RNA polymerase	2
vvi03040	Spliceosome	2
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4
ppo04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	5
hvu00300	Lysine biosynthesis	3
hvu01210	2-Oxocarboxylic acid metabolism	2
hvu04146	Peroxisome	2
hvu00261	Monobactam biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00860	Porphyrin metabolism	3
ghi01240	Biosynthesis of cofactors	3
ghi04626	Plant-pathogen interaction	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00860	Porphyrin metabolism	3
ghi01240	Biosynthesis of cofactors	3
ghi04626	Plant-pathogen interaction	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03420	Nucleotide excision repair	3
sbi03020	RNA polymerase	2
sbi03040	Spliceosome	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

5720868

832095

100790392

101260803

4349678

107276049

100384529

103856391

103845727

100243066

7458901

7495675

11415018

123103106

123111296

123120436

123451872

121220171

107926229

106434386

106386747

106371790

8083056

102598074

102617207

100826173

107801599

107765128

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g278800v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g278800v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	1	1	2	1	2	1	2	1	3	1	2	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g278800v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g278800v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**