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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g282600v5   uncharacterized protein 
 ath-u.5   AT5G05450   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100807011   DEAD-box ATP-dependent RNA helicase 18 
 gma-u.5   100801482   DEAD-box ATP-dependent RNA helicase 18 
 sly-u.5   101259209   DEAD-box ATP-dependent RNA helicase 18 
 osa-u.5   4324413   DEAD-box ATP-dependent RNA helicase 18-like 
 zma-u.5   100280924   ATP-dependent rRNA helicase spb4 
 vvi-u.5   100260487   DEAD-box ATP-dependent RNA helicase 18 
 ppo-u.5   7462096   DEAD-box ATP-dependent RNA helicase 18 
 mtr-u.5   11406689   DEAD-box ATP-dependent RNA helicase 18 

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Top 50 coexpressed genes to CHLRE_06g282600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g282600v5 (cre-r.1 coexpression data)

CoexMap"5720946"


creCHLRE_06g282600v5 | Entrez gene ID : 5720946    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042923997.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_042923997.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042923997.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g282600v5

.
ath-u.5
for
AT5G05450

.
gma-u.5
for
100807011

.
gma-u.5
for
100801482

.
sly-u.5
for
101259209

.
osa-u.5
for
4324413

.
zma-u.5
for
100280924

.
vvi-u.5
for
100260487

.
ppo-u.5
for
7462096

.
mtr-u.5
for
11406689

.


Ortholog ID: 8118
Species gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol LOC100807011 LOC100801482 LOC101259209 LOC4324413 LOC100280924 LOC103850585 LOC103846897 LOC100260487 LOC7462096 LOC11406689 LOC123060326 LOC123068847 LOC123442856 LOC107955206 LOC106419215 LOC106422773 CHLRE_06g282600v5 LOC8075104 LOC102582063 LOC102613104 LOC100839511 LOC107763322 LOC107802514
Function* DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18-like ATP-dependent rRNA helicase spb4 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18-like DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 uncharacterized protein DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18-like DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18 DEAD-box ATP-dependent RNA helicase 18-like DEAD-box ATP-dependent RNA helicase 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100807011 100801482 101259209 4324413 100280924 103850585 103846897 100260487 7462096 11406689 123060326 123068847 123442856 107955206 106419215 106422773 5720946 8075104 102582063 102613104 100839511 107763322 107802514
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