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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g284400v5   uncharacterized protein 
 gma-u.5   100813353   homologous-pairing protein 2 homolog 
 gma-u.5   100810135   homologous-pairing protein 2 homolog 
 sly-u.5   101258653   homologous-pairing protein 2 homolog 
 osa-u.5   112936008   homologous-pairing protein 2 homolog 
 zma-u.5   103643888   homologous-pairing protein 2 homolog 
 zma-u.5   100282702   Homologous-pairing protein 2 homolog 
 ppo-u.5   7488346   homologous-pairing protein 2 homolog 
 mtr-u.5   11432620   homologous-pairing protein 2 homolog 

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Top 50 coexpressed genes to CHLRE_06g284400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g284400v5 (cre-r.1 coexpression data)

CoexMap"5720979"


creCHLRE_06g284400v5 | Entrez gene ID : 5720979      
Species cre gma sly osa zma ppo mtr hvu sot vvi tae nta bra cit ghi bna bdi ath sbi
Paralog 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000709 [list] [network] meiotic joint molecule formation  (2 genes)  IEA  
GO:0010774 [list] [network] meiotic strand invasion involved in reciprocal meiotic recombination  (2 genes)  IEA  
GO:0007129 [list] [network] homologous chromosome pairing at meiosis  (8 genes)  IEA  
GO CC
GO:0120231 [list] [network] DNA recombinase auxiliary factor complex  (2 genes)  IEA  
GO:0000794 [list] [network] condensed nuclear chromosome  (13 genes)  IEA  
GO MF
GO:0120230 [list] [network] recombinase activator activity  (2 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (175 genes)  IEA  
Protein XP_001695346.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 4,  cyto 2,  plas 1,  mito 1  (predict for XP_001695346.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001695346.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g284400v5

.
gma-u.5
for
100813353

.
gma-u.5
for
100810135

.
sly-u.5
for
101258653

.
osa-u.5
for
112936008

.
zma-u.5
for
103643888

.
zma-u.5
for
100282702

.
ppo-u.5
for
7488346

.
mtr-u.5
for
11432620

.


Ortholog ID: 9774
Species gma gma sly osa zma zma bra ppo mtr tae tae hvu ghi ghi bna cre sbi sot bdi nta nta
Symbol LOC100813353 LOC100810135 LOC101258653 LOC112936008 LOC100282702 LOC103643888 LOC103871941 LOC7488346 LOC11432620 LOC123087118 LOC123095855 LOC123447435 LOC107920456 LOC107932390 LOC106346434 CHLRE_06g284400v5 LOC8062915 LOC102592078 LOC100838246 LOC107809315 LOC107797815
Function* homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog Homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog uncharacterized protein homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 3
ppo03420 Nucleotide excision repair 3
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813353 100810135 101258653 112936008 100282702 103643888 103871941 7488346 11432620 123087118 123095855 123447435 107920456 107932390 106346434 5720979 8062915 102592078 100838246 107809315 107797815
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