ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g290300v5	uncharacterized protein
cre-r.1	CHLRE_01g005001v5	uncharacterized protein
ath-u.5	AT2G38695	Gag-Pol polyprotein/retrotransposon
gma-u.5	100812769	uncharacterized LOC100812769
gma-u.5	100814328	uncharacterized LOC100814328
sly-u.5	101260146	uncharacterized LOC101260146
sly-u.5	101268479	uncharacterized LOC101268479
osa-u.5	4336873	uncharacterized LOC4336873
osa-u.5	4347184	uncharacterized LOC4347184
zma-u.5	100276234	uncharacterized LOC100276234
bra-r.6	103857808	uncharacterized LOC103857808
ppo-u.5	7461324	uncharacterized LOC7461324
mtr-u.5	25488552	uncharacterized LOC25488552
hvu-r.1	123397954	uncharacterized LOC123397954
ghi-r.1	107896224	uncharacterized LOC107896224
ghi-r.1	107915201	uncharacterized LOC107915201
sbi-r.1	8081005	uncharacterized LOC8081005
sot-r.1	102580174	uncharacterized LOC102580174
sot-r.1	102578377	uncharacterized LOC102578377
cit-r.1	102628698	uncharacterized LOC102628698
cit-r.1	102618398	uncharacterized LOC102618398
bdi-r.1	100823337	uncharacterized LOC100823337
nta-r.1	107813410	uncharacterized LOC107813410
nta-r.1	107812366	uncharacterized LOC107812366
nta-r.1	107770461	uncharacterized LOC107770461

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042924117.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 2, golg 1, mito_plas 1

(predict for XP_042924117.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_042924117.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g290300v5	cre-r.1 for CHLRE_01g005001v5	ath-u.5 for AT2G38695	gma-u.5 for 100812769	gma-u.5 for 100814328	sly-u.5 for 101260146	sly-u.5 for 101268479	osa-u.5 for 4336873	osa-u.5 for 4347184	zma-u.5 for 100276234	bra-r.6 for 103857808	ppo-u.5 for 7461324	mtr-u.5 for 25488552	hvu-r.1 for 123397954	ghi-r.1 for 107896224	ghi-r.1 for 107915201	sbi-r.1 for 8081005	sot-r.1 for 102580174	sot-r.1 for 102578377	cit-r.1 for 102628698	cit-r.1 for 102618398	bdi-r.1 for 100823337	nta-r.1 for 107813410	nta-r.1 for 107812366	nta-r.1 for 107770461

Ortholog

Ortholog ID: 4836

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Gag-Pol polyprotein/retrotransposon

uncharacterized LOC100812769

uncharacterized LOC100814328

uncharacterized LOC101260146

uncharacterized LOC101268479

uncharacterized LOC4336873

uncharacterized LOC4347184

uncharacterized LOC100276234

uncharacterized LOC103857808

uncharacterized LOC100264237

uncharacterized LOC100263253

uncharacterized LOC7461324

uncharacterized LOC25488552

uncharacterized LOC123121509

uncharacterized LOC123397954

uncharacterized LOC107896224

uncharacterized LOC107915201

uncharacterized LOC8081005

uncharacterized LOC102580174

uncharacterized LOC102578377

uncharacterized LOC102628698

uncharacterized LOC102618398

uncharacterized LOC100823337

uncharacterized LOC107813410

uncharacterized LOC107812366

uncharacterized LOC107783463

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00710	Carbon fixation by Calvin cycle	5
cre01200	Carbon metabolism	5
cre00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2
osa00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2
zma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00740	Riboflavin metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00051	Fructose and mannose metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00380	Tryptophan metabolism	2
nta03410	Base excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

5721081

5727649

2745586

100812769

100814328

101260146

101268479

4336873

4347184

100276234

103857808

100264237

100263253

7461324

25488552

123121509

123397954

107896224

107915201

8081005

102580174

102578377

102628698

102618398

100823337

107813410

107812366

107783463

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g290300v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g290300v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	ppo	mtr	hvu	ghi	sbi	sot	cit	bdi	nta	tae	bna	vvi
Paralog	2	1	2	2	2	1	1	1	1	1	2	1	2	2	1	3	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g290300v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g290300v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**