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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g149050v5   uncharacterized protein 
 cre-r.1   CHLRE_03g206033v5   uncharacterized protein 
 cre-r.1   CHLRE_16g672850v5   uncharacterized protein 
 ath-u.5   AIR12   auxin-induced in root cultures-like protein 
 ath-u.5   AT5G47530   Auxin-responsive family protein 
 sly-u.5   101263424   cytochrome b561 and DOMON domain-containing protein At3g07570-like 
 sly-u.5   101263549   cytochrome b561 and DOMON domain-containing protein At3g61750-like 
 osa-u.5   9269196   cytochrome b561 and DOMON domain-containing protein At3g07570 
 osa-u.5   9266987   cytochrome b561 and DOMON domain-containing protein At3g61750 
 osa-u.5   4324959   cytochrome b561 and DOMON domain-containing protein At3g07570 
 zma-u.5   103643338   auxin-induced in root cultures protein 12 
 zma-u.5   100280845   AIR12 
 zma-u.5   100281813   uncharacterized LOC100281813 
 bra-r.6   103841768   cytochrome b561 and DOMON domain-containing protein At3g59070 
 ppo-u.5   7459507   cytochrome b561 and DOMON domain-containing protein At3g25290 
 ppo-u.5   7492778   cytochrome b561 and DOMON domain-containing protein At3g61750 
 mtr-u.5   25499729   cytochrome b561 and DOMON domain-containing protein At3g61750 
 tae-r.2   123070562   cytochrome b561 and DOMON domain-containing protein At3g61750 
 tae-r.2   123067437   cytochrome b561 and DOMON domain-containing protein At3g61750 
 tae-r.2   123078971   cytochrome b561 and DOMON domain-containing protein At3g61750 
 hvu-r.1   123444116   cytochrome b561 and DOMON domain-containing protein At3g61750 
 ghi-r.1   107952801   cytochrome b561 and DOMON domain-containing protein At5g35735 
 ghi-r.1   107948174   cytochrome b561 and DOMON domain-containing protein At3g61750 
 ghi-r.1   107945866   cytochrome b561 and DOMON domain-containing protein At3g61750 
 bna-r.1   106390800   cytochrome b561 and DOMON domain-containing protein At5g35735-like 
 bna-r.1   106397012   auxin-induced in root cultures protein 12 
 sbi-r.1   8062415   auxin-induced in root cultures protein 12 
 sot-r.1   102593912   cytochrome b561 and DOMON domain-containing protein At5g47530 
 cit-r.1   107177770   auxin-induced in root cultures protein 12 
 bdi-r.1   100826363   cytochrome b561 and DOMON domain-containing protein At5g47530 
 bdi-r.1   100829918   auxin-induced in root cultures protein 12 
 bdi-r.1   100831638   cytochrome b561 and DOMON domain-containing protein At3g61750 
 nta-r.1   107801843   cytochrome b561 and DOMON domain-containing protein At5g47530 
 nta-r.1   107796389   cytochrome b561 and DOMON domain-containing protein At5g47530 

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Top 50 coexpressed genes to CHLRE_03g149050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g149050v5 (cre-r.1 coexpression data)

CoexMap"5721176"


creCHLRE_03g149050v5 | Entrez gene ID : 5721176      
Species cre ath sly osa zma bra ppo mtr tae hvu ghi bna sbi sot cit bdi nta vvi gma
Paralog 3 2 2 3 3 1 2 1 3 1 3 2 1 1 1 3 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042925613.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_042925613.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042925613.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g149050v5
cre-r.1
for
CHLRE_03g206033v5
cre-r.1
for
CHLRE_16g672850v5
ath-u.5
for
AIR12
ath-u.5
for
AT5G47530
sly-u.5
for
101263424
sly-u.5
for
101263549
osa-u.5
for
9269196
osa-u.5
for
9266987
osa-u.5
for
4324959
zma-u.5
for
103643338
zma-u.5
for
100280845
zma-u.5
for
100281813
bra-r.6
for
103841768
ppo-u.5
for
7459507
ppo-u.5
for
7492778
mtr-u.5
for
25499729
tae-r.2
for
123070562
tae-r.2
for
123067437
tae-r.2
for
123078971
hvu-r.1
for
123444116
ghi-r.1
for
107952801
ghi-r.1
for
107948174
ghi-r.1
for
107945866
bna-r.1
for
106390800
bna-r.1
for
106397012
sbi-r.1
for
8062415
sot-r.1
for
102593912
cit-r.1
for
107177770
bdi-r.1
for
100826363
bdi-r.1
for
100829918
bdi-r.1
for
100831638
nta-r.1
for
107801843
nta-r.1
for
107796389


Ortholog ID: 58
Species cre cre cre ath ath ath gma gma sly sly osa osa osa zma zma zma bra bra bra vvi mtr mtr mtr tae tae hvu hvu hvu ghi ghi ghi bna bna sbi sot sot cit cit cit bdi bdi nta nta nta
Symbol CHLRE_03g149050v5 CHLRE_03g206033v5 CHLRE_16g672850v5 AT5G35735 AT4G12980 AT3G61750 LOC100791878 LOC100776506 LOC101267742 LOC101255208 LOC9266987 LOC4324390 LOC4347483 LOC100280845 LOC103653190 LOC100282143 LOC103859230 LOC103849234 LOC103859216 LOC100261667 LOC25499729 LOC11438899 LOC11437588 LOC123045888 LOC123165963 LOC123449443 LOC123427114 LOC123410505 LOC107910958 LOC107954952 LOC107956240 LOC106425350 LOC125583360 LOC8058960 LOC102597137 LOC102589215 LOC107177770 LOC102623024 LOC102622025 LOC100839701 LOC100841501 LOC107796023 LOC107771464 LOC107764771
Function* uncharacterized protein uncharacterized protein uncharacterized protein Auxin-responsive family protein Auxin-responsive family protein Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein cytochrome b561 and DOMON domain-containing protein At5g47530 cytochrome b561 and DOMON domain-containing protein At4g12980 cytochrome b561 and DOMON domain-containing protein At3g25290 auxin-induced in root cultures protein 12-like cytochrome b561 and DOMON domain-containing protein At3g61750 cytochrome b561 and DOMON domain-containing protein At3g61750 cytochrome b561 and DOMON domain-containing protein At3g25290 AIR12 cytochrome b561 and DOMON domain-containing protein At5g47530 dopamine beta-monooxygenase cytochrome b561 and DOMON domain-containing protein At3g07570 cytochrome b561 and DOMON domain-containing protein At3g07570 auxin-induced in root cultures protein 12 cytochrome b561 and DOMON domain-containing protein At3g25290 cytochrome b561 and DOMON domain-containing protein At3g61750 cytochrome b561 and DOMON domain-containing protein At3g25290 cytochrome b561 and DOMON domain-containing protein At5g47530 cytochrome b561 and DOMON domain-containing protein At3g07570 auxin-induced in root cultures protein 12 cytochrome b561 and DOMON domain-containing protein At4g12980-like cytochrome b561 and DOMON domain-containing protein At3g07570-like cytochrome b561 and DOMON domain-containing protein At4g12980-like cytochrome b561 and DOMON domain-containing protein At3g07570 cytochrome b561 and DOMON domain-containing protein At5g35735 auxin-induced in root cultures protein 12 cytochrome b561 and DOMON domain-containing protein At4g17280 auxin-induced in root cultures protein 12-like cytochrome b561 and DOMON domain-containing protein At3g25290 cytochrome b561 and DOMON domain-containing protein At5g47530-like cytochrome b561 and DOMON domain-containing protein At3g07570-like auxin-induced in root cultures protein 12 cytochrome b561 and DOMON domain-containing protein At3g07570 cytochrome b561 and DOMON domain-containing protein At3g61750 cytochrome b561 and DOMON domain-containing protein At3g61750 cytochrome b561 and DOMON domain-containing protein At4g12980 cytochrome b561 and DOMON domain-containing protein At3g25290 cytochrome b561 and DOMON domain-containing protein At5g47530 cytochrome b561 and DOMON domain-containing protein At3g25290-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra00270 Cysteine and methionine metabolism 3
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 4
mtr04016 MAPK signaling pathway - plant 3
mtr00943 Isoflavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00260 Glycine, serine and threonine metabolism 2
hvu01200 Carbon metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
ghi02010 ABC transporters 2
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 5
ghi01250 Biosynthesis of nucleotide sugars 5
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00053 Ascorbate and aldarate metabolism 3
ghi00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 4
sot00940 Phenylpropanoid biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
sot00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00360 Phenylalanine metabolism 3
cit00940 Phenylpropanoid biosynthesis 3
cit00010 Glycolysis / Gluconeogenesis 3
cit04075 Plant hormone signal transduction 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 5
bdi04517 IgSF CAM signaling 5
bdi04814 Motor proteins 5
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta04820 Cytoskeleton in muscle cells 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721176 5724995 5721411 833550 826910 825348 100791878 100776506 101267742 101255208 9266987 4324390 4347483 100280845 103653190 100282143 103859230 103849234 103859216 100261667 25499729 11438899 11437588 123045888 123165963 123449443 123427114 123410505 107910958 107954952 107956240 106425350 125583360 8058960 102597137 102589215 107177770 102623024 102622025 100839701 100841501 107796023 107771464 107764771
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