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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g145207v5   uncharacterized protein 
 ath-u.5   RPH1   resistance to phytophthora 1 
 gma-u.5   100795293   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 gma-u.5   100775266   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 sly-u.5   101259047   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 osa-u.5   4338746   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 bra-r.6   103866331   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 vvi-u.5   100240873   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 ppo-u.5   7457985   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 mtr-u.5   25499066   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 tae-r.2   123181967   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 tae-r.2   123092827   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 tae-r.2   123055152   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 hvu-r.1   123441607   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 ghi-r.1   107949037   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 ghi-r.1   107913095   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 bna-r.1   106434847   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 bna-r.1   111215506   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 sbi-r.1   8085109   uncharacterized LOC8085109 
 sot-r.1   RPH1   Protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 cit-r.1   102608626   hypothetical protein 
 bdi-r.1   100821919   uncharacterized LOC100821919 
 nta-r.1   107826479   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 
 nta-r.1   107803005   protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic 

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Top 50 coexpressed genes to CHLRE_03g145207v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g145207v5 (cre-r.1 coexpression data)

CoexMap"5721274"


creCHLRE_03g145207v5 | Entrez gene ID : 5721274      
Species cre ath gma sly osa bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta zma
Paralog 1 1 2 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006952 [list] [network] defense response  (12 genes)  IEA  
GO CC
GO MF
Protein XP_042925541.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_042925541.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for XP_042925541.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g145207v5
ath-u.5
for
RPH1
gma-u.5
for
100795293
gma-u.5
for
100775266
sly-u.5
for
101259047
osa-u.5
for
4338746
bra-r.6
for
103866331
vvi-u.5
for
100240873
ppo-u.5
for
7457985
mtr-u.5
for
25499066
tae-r.2
for
123181967
tae-r.2
for
123092827
tae-r.2
for
123055152
hvu-r.1
for
123441607
ghi-r.1
for
107949037
ghi-r.1
for
107913095
bna-r.1
for
106434847
bna-r.1
for
111215506
sbi-r.1
for
8085109
sot-r.1
for
RPH1
cit-r.1
for
102608626
bdi-r.1
for
100821919
nta-r.1
for
107826479
nta-r.1
for
107803005


Ortholog ID: 10726
Species cre ath gma gma sly osa bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g145207v5 RPH1 LOC100795293 LOC100775266 LOC101259047 LOC4338746 LOC103866331 LOC100240873 LOC7457985 LOC25499066 LOC123181967 LOC123092827 LOC123055152 LOC123441607 LOC107949037 LOC107913095 LOC106434847 LOC111215506 LOC8085109 RPH1 LOC102608626 LOC100821919 LOC107826479 LOC107803005
Function* uncharacterized protein resistance to phytophthora 1 protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic uncharacterized LOC8085109 Protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic hypothetical protein uncharacterized LOC100821919 protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 6
cre01240 Biosynthesis of cofactors 3
cre00900 Terpenoid backbone biosynthesis 2
cre00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00195 Photosynthesis 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 2
bna00061 Fatty acid biosynthesis 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 5
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 2
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721274 819419 100795293 100775266 101259047 4338746 103866331 100240873 7457985 25499066 123181967 123092827 123055152 123441607 107949037 107913095 106434847 111215506 8085109 102592434 102608626 100821919 107826479 107803005
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