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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g144867v5   uncharacterized protein 
 ath-u.5   AT3G55070   LisH/CRA/RING-U-box domains-containing protein 
 gma-u.5   100805248   uncharacterized LOC100805248 
 gma-u.5   100779522   protein MAEA homolog 
 sly-u.5   101243883   macrophage erythroblast attacher 
 osa-u.5   4337882   protein MAEA homolog 
 zma-u.5   100279208   uncharacterized LOC100279208 
 vvi-u.5   100257054   protein MAEA homolog 
 ppo-u.5   7469785   protein MAEA homolog 
 mtr-u.5   25485750   protein MAEA homolog 

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Top 50 coexpressed genes to CHLRE_03g144867v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g144867v5 (cre-r.1 coexpression data)

CoexMap"5721286"


creCHLRE_03g144867v5 | Entrez gene ID : 5721286      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (98 genes)  IEA  
GO CC
GO:0034657 [list] [network] GID complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (132 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042925526.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl_plas 2,  nucl 2,  cyto 2,  chlo_mito 2  (predict for XP_042925526.1)
Subcellular
localization
TargetP
other 5  (predict for XP_042925526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g144867v5

.
ath-u.5
for
AT3G55070

.
gma-u.5
for
100805248

.
gma-u.5
for
100779522

.
sly-u.5
for
101243883

.
osa-u.5
for
4337882

.
zma-u.5
for
100279208

.
vvi-u.5
for
100257054

.
ppo-u.5
for
7469785

.
mtr-u.5
for
25485750

.


Ortholog ID: 7624
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G55070 LOC100779522 LOC100805248 LOC101243883 LOC4337882 LOC100279208 LOC103841423 LOC100257054 LOC7469785 LOC25485750 LOC123180604 LOC123114070 LOC123426251 LOC107934210 LOC107957100 LOC106445338 LOC106391244 CHLRE_03g144867v5 LOC8080918 LOC102582250 LOC102610102 LOC100830732 LOC107823425 LOC107831431
Function* LisH/CRA/RING-U-box domains-containing protein protein MAEA homolog uncharacterized LOC100805248 macrophage erythroblast attacher protein MAEA homolog uncharacterized LOC100279208 protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog uncharacterized protein macrophage erythroblast attacher macrophage erythroblast attacher protein MAEA homolog protein MAEA homolog protein MAEA homolog protein MAEA homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa00600 Sphingolipid metabolism 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 4
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824673 100779522 100805248 101243883 4337882 100279208 103841423 100257054 7469785 25485750 123180604 123114070 123426251 107934210 107957100 106445338 106391244 5721286 8080918 102582250 102610102 100830732 107823425 107831431
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