ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_16g678200v5	uncharacterized protein
ath-u.5	GLYI8	Lactoylglutathione lyase / glyoxalase I family protein
ath-u.5	GLYI4	Lactoylglutathione lyase / glyoxalase I family protein
ath-u.5	GLYI7	Lactoylglutathione lyase / glyoxalase I family protein
gma-u.5	GLYI-22	putative lactoylglutathione lyase
gma-u.5	GLYI-20	putative lactoylglutathione lyase
sly-u.5	101251435	glyoxylase I 4
sly-u.5	101250492	glyoxylase I 4
osa-u.5	4337946	glyoxylase I 4
osa-u.5	4327121	glyoxylase I 4
zma-u.5	100286260	lactoylglutathione lyase
zma-u.5	100283197	lactoylglutathione lyase
bra-r.6	103872329	uncharacterized LOC103872329
bra-r.6	103853278	metallothiol transferase FosB
bra-r.6	103836030	uncharacterized LOC103836030
vvi-u.5	100852802	glyoxylase I 4
vvi-u.5	100244070	glyoxylase I 4
vvi-u.5	100266411	glyoxylase I 4
ppo-u.5	7490956	glyoxylase I 4
ppo-u.5	18099221	glyoxylase I 4
ppo-u.5	18098312	glyoxylase I 4
mtr-u.5	11433079	metallothiol transferase FosB
mtr-u.5	11439716	uncharacterized LOC11439716
tae-r.2	123040823	uncharacterized LOC123040823
hvu-r.1	123443049	uncharacterized LOC123443049
hvu-r.1	123429548	uncharacterized LOC123429548
hvu-r.1	123426754	methylmalonyl-CoA epimerase, mitochondrial-like
ghi-r.1	107932178	uncharacterized LOC107932178
ghi-r.1	107918881	uncharacterized LOC107918881
bna-r.1	106346665	glyoxylase I 4-like
sbi-r.1	110429551	uncharacterized LOC110429551
sbi-r.1	8072708	uncharacterized LOC8072708
sot-r.1	102593019	uncharacterized LOC102593019
sot-r.1	102593899	uncharacterized LOC102593899
sot-r.1	102578488	lactoylglutathione lyase-like
cit-r.1	102622259	hypothetical protein
cit-r.1	102630180	hypothetical protein
bdi-r.1	100842326	uncharacterized LOC100842326
bdi-r.1	100829748	uncharacterized LOC100829748
bdi-r.1	100821708	uncharacterized LOC100821708
nta-r.1	107797473	glyoxylase I 4-like
nta-r.1	107829187	glyoxylase I 4-like
nta-r.1	107797663	glyoxylase I 4-like

Top 50 coexpressed genes to CHLRE_16g678200v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_16g678200v5 (cre-r.1 coexpression data)

CoexMap"5721515"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042916056.1 [sequence] [blastp]
XP_042916057.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, E.R. 3, mito 1, cyto_E.R. 1	(predict for XP_042916056.1)
chlo 4, nucl 3, cysk 1, cyto_nucl 1	(predict for XP_042916057.1)

Subcellular
localization
TargetP

mito 6, other 4	(predict for XP_042916056.1)
mito 6, other 4	(predict for XP_042916057.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_16g678200v5	ath-u.5 for GLYI8	ath-u.5 for GLYI4	ath-u.5 for GLYI7	gma-u.5 for GLYI-22	gma-u.5 for GLYI-20	sly-u.5 for 101251435	sly-u.5 for 101250492	osa-u.5 for 4337946	osa-u.5 for 4327121	zma-u.5 for 100286260	zma-u.5 for 100283197	bra-r.6 for 103872329	bra-r.6 for 103853278	bra-r.6 for 103836030	vvi-u.5 for 100852802	vvi-u.5 for 100244070	vvi-u.5 for 100266411	ppo-u.5 for 7490956	ppo-u.5 for 18099221	ppo-u.5 for 18098312	mtr-u.5 for 11433079	mtr-u.5 for 11439716	tae-r.2 for 123040823	hvu-r.1 for 123443049	hvu-r.1 for 123429548	hvu-r.1 for 123426754	ghi-r.1 for 107932178	ghi-r.1 for 107918881	bna-r.1 for 106346665	sbi-r.1 for 110429551	sbi-r.1 for 8072708	sot-r.1 for 102593019	sot-r.1 for 102593899	sot-r.1 for 102578488	cit-r.1 for 102622259	cit-r.1 for 102630180	bdi-r.1 for 100842326	bdi-r.1 for 100829748	bdi-r.1 for 100821708	nta-r.1 for 107797473	nta-r.1 for 107829187	nta-r.1 for 107797663

Ortholog

Ortholog ID: 419

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_16g678200v5

GLYI8

GLYI4

GLYI7

GLYI-22

GLYI-20

GLYI-24

Function^*

uncharacterized protein

Lactoylglutathione lyase / glyoxalase I family protein

putative lactoylglutathione lyase

glyoxylase I 4

glyoxylase I 4-like

glyoxylase I 4

lactoylglutathione lyase

uncharacterized LOC103648836

uncharacterized LOC103872329

uncharacterized LOC103836030

uncharacterized LOC103842901

glyoxylase I 4

uncharacterized LOC11439716

metallothiol transferase FosB

uncharacterized LOC123040823

uncharacterized LOC123060541

uncharacterized LOC123166551

uncharacterized LOC123443049

uncharacterized LOC107932178

uncharacterized LOC107917056

metallothiol transferase FosB

glyoxylase I 4

uncharacterized LOC110429551

uncharacterized LOC8072708

lactoylglutathione lyase-like

metallothiol transferase FosB

hypothetical protein

uncharacterized LOC100842326

uncharacterized LOC100829748

uncharacterized LOC100821708

glyoxylase I 4-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00310	Lysine degradation	3
ath00380	Tryptophan metabolism	2
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	2
gma00562	Inositol phosphate metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	5
bra00640	Propanoate metabolism	3
bra00410	beta-Alanine metabolism	3
bra01200	Carbon metabolism	3
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00073	Cutin, suberine and wax biosynthesis	2
bra00460	Cyanoamino acid metabolism	2
bra00500	Starch and sucrose metabolism	2
bra00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00510	N-Glycan biosynthesis	2
vvi00513	Various types of N-glycan biosynthesis	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00250	Alanine, aspartate and glutamate metabolism	3
mtr00460	Cyanoamino acid metabolism	2
mtr00040	Pentose and glucuronate interconversions	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	2
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	2
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	4
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00061	Fatty acid biosynthesis	2
bdi00780	Biotin metabolism	2
bdi01212	Fatty acid metabolism	2
bdi01240	Biosynthesis of cofactors	2
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00196	Photosynthesis - antenna proteins	4
bdi00860	Porphyrin metabolism	3
bdi01040	Biosynthesis of unsaturated fatty acids	2
bdi01212	Fatty acid metabolism	2
bdi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2

Expression

Expression pattern

Entrez Gene ID^*

5721515

817390

838107

844356

102662470

100305695

100818691

101251435

101258312

4337946

100286260

100283197

103648836

103872329

103836030

103842901

100852802

100244070

18099221

18098312

7480166

11439716

11423798

123040823

123060541

123166551

123443049

107932178

107917056

107897607

106364280

106452243

110429551

8072708

102578488

102590728

102594644

102622259

102630180

100842326

100829748

100821708

107806506

107779854

107763460

The preparation time of this page was 0.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	2	2	2	2	3	3	3	2	1	3	2	1	2	3	2	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_16g678200v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g678200v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**