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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g270850v5   uncharacterized protein 
 ath-u.5   CHR8   chromatin remodeling 8 
 gma-u.5   100820025   protein CHROMATIN REMODELING 8 
 sly-u.5   101252814   protein CHROMATIN REMODELING 8 
 osa-u.5   CSB   DNA excision repair protein CSB-like 
 zma-u.5   103649923   DNA excision repair protein CSB 
 vvi-u.5   100253251   protein CHROMATIN REMODELING 8 
 ppo-u.5   7476928   protein CHROMATIN REMODELING 8 
 mtr-u.5   25484243   protein CHROMATIN REMODELING 8 

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Top 50 coexpressed genes to CHLRE_06g270850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g270850v5 (cre-r.1 coexpression data)

CoexMap"5721844"


creCHLRE_06g270850v5 | Entrez gene ID : 5721844      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03420 [list] [network] Nucleotide excision repair (42 genes)
GO BP
GO:0006283 [list] [network] transcription-coupled nucleotide-excision repair  (4 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (31 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042923645.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_042923645.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042923645.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g270850v5

.
ath-u.5
for
CHR8

.
gma-u.5
for
100820025

.
sly-u.5
for
101252814

.
osa-u.5
for
CSB

.
zma-u.5
for
103649923

.
vvi-u.5
for
100253251

.
ppo-u.5
for
7476928

.
mtr-u.5
for
25484243

.


Ortholog ID: 10658
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sot cit bdi nta nta
Symbol CHR8 LOC100820025 LOC101252814 CSB LOC103649923 LOC103861842 LOC100253251 LOC7476928 LOC25484243 LOC123068696 LOC123077208 LOC123442739 LOC107927455 LOC107920099 LOC106389776 LOC106410369 CHLRE_06g270850v5 LOC102595123 LOC102607652 LOC100838784 LOC107801393 LOC107813734
Function* chromatin remodeling 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB-like DNA excision repair protein CSB protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB DNA excision repair protein CSB DNA excision repair protein CSB protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 uncharacterized protein protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB protein CHROMATIN REMODELING 8 DNA excision repair protein CSB
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 3
ath03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03082 ATP-dependent chromatin remodeling 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816391 100820025 101252814 4326441 103649923 103861842 100253251 7476928 25484243 123068696 123077208 123442739 107927455 107920099 106389776 106410369 5721844 102595123 102607652 100838784 107801393 107813734
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