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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g256300v5   uncharacterized protein 
 ath-u.5   AT4G16580   Protein phosphatase 2C family protein 
 ath-u.5   AT5G66720   Protein phosphatase 2C family protein 
 gma-u.5   100784475   probable protein phosphatase 2C 55 
 gma-u.5   100805475   probable protein phosphatase 2C 55 
 gma-u.5   100802359   probable protein phosphatase 2C 55 
 sly-u.5   101260900   probable protein phosphatase 2C 55 
 sly-u.5   101253704   probable protein phosphatase 2C 55 
 sly-u.5   101253583   probable protein phosphatase 2C 55 
 osa-u.5   4334524   probable protein phosphatase 2C 80 
 zma-u.5   100191645   putative protein phosphatase 2C 55 
 zma-u.5   103625788   probable protein phosphatase 2C 80 
 bra-r.6   103869374   probable protein phosphatase 2C 55 
 bra-r.6   103829575   probable protein phosphatase 2C 80 
 vvi-u.5   100261557   probable protein phosphatase 2C 55 
 vvi-u.5   100252344   probable protein phosphatase 2C 55 
 ppo-u.5   7473153   probable protein phosphatase 2C 80 
 ppo-u.5   18105020   probable protein phosphatase 2C 55 
 ppo-u.5   18099303   probable protein phosphatase 2C 80 
 mtr-u.5   25482112   probable protein phosphatase 2C 55 
 mtr-u.5   11426436   probable protein phosphatase 2C 80 
 tae-r.2   123136219   probable protein phosphatase 2C 55 
 tae-r.2   123132188   probable protein phosphatase 2C 55 
 tae-r.2   123123378   probable protein phosphatase 2C 80 
 hvu-r.1   123402615   probable protein phosphatase 2C 55 
 hvu-r.1   123452895   probable protein phosphatase 2C 80 
 ghi-r.1   107905409   probable protein phosphatase 2C 55 
 ghi-r.1   121209695   probable protein phosphatase 2C 80 
 ghi-r.1   107960399   probable protein phosphatase 2C 55 
 bna-r.1   106358336   probable protein phosphatase 2C 80 
 bna-r.1   106392003   probable protein phosphatase 2C 55 
 bna-r.1   106390366   probable protein phosphatase 2C 80 
 sbi-r.1   8057093   probable protein phosphatase 2C 55 
 sot-r.1   102581490   probable protein phosphatase 2C 55 
 sot-r.1   102595725   probable protein phosphatase 2C 55 
 sot-r.1   102580955   probable protein phosphatase 2C 55 
 cit-r.1   102616336   probable protein phosphatase 2C 80 
 cit-r.1   102625999   probable protein phosphatase 2C 55 
 bdi-r.1   100822880   probable protein phosphatase 2C 55 
 bdi-r.1   100823140   probable protein phosphatase 2C 55 
 nta-r.1   107761190   putative protein phosphatase 2C 55 
 nta-r.1   107814849   putative protein phosphatase 2C 55 
 nta-r.1   107826729   putative protein phosphatase 2C 55 

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Top 50 coexpressed genes to CHLRE_06g256300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g256300v5 (cre-r.1 coexpression data)

CoexMap"5722118"


creCHLRE_06g256300v5 | Entrez gene ID : 5722118      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 3 1 2 2 2 3 2 3 2 3 3 1 3 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001696623.1 [sequence] [blastp]
XP_042923409.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_001696623.1)
chlo 10  (predict for XP_042923409.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_001696623.1)
mito 7,  chlo 3  (predict for XP_042923409.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g256300v5
ath-u.5
for
AT4G16580
ath-u.5
for
AT5G66720
gma-u.5
for
100784475
gma-u.5
for
100805475
gma-u.5
for
100802359
sly-u.5
for
101260900
sly-u.5
for
101253704
sly-u.5
for
101253583
osa-u.5
for
4334524
zma-u.5
for
100191645
zma-u.5
for
103625788
bra-r.6
for
103869374
bra-r.6
for
103829575
vvi-u.5
for
100261557
vvi-u.5
for
100252344
ppo-u.5
for
7473153
ppo-u.5
for
18105020
ppo-u.5
for
18099303
mtr-u.5
for
25482112
mtr-u.5
for
11426436
tae-r.2
for
123136219
tae-r.2
for
123132188
tae-r.2
for
123123378
hvu-r.1
for
123402615
hvu-r.1
for
123452895
ghi-r.1
for
107905409
ghi-r.1
for
121209695
ghi-r.1
for
107960399
bna-r.1
for
106358336
bna-r.1
for
106392003
bna-r.1
for
106390366
sbi-r.1
for
8057093
sot-r.1
for
102581490
sot-r.1
for
102595725
sot-r.1
for
102580955
cit-r.1
for
102616336
cit-r.1
for
102625999
bdi-r.1
for
100822880
bdi-r.1
for
100823140
nta-r.1
for
107761190
nta-r.1
for
107814849
nta-r.1
for
107826729


Ortholog ID: 2485
Species cre ath ath gma gma gma sly sly sly osa zma zma bra bra vvi vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sot sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_06g256300v5 AT4G16580 AT5G66720 LOC100784475 LOC100805475 LOC100802359 LOC101260900 LOC101253704 LOC101244356 LOC4334524 LOC100191645 LOC103625788 LOC103869374 LOC103829575 LOC100261557 LOC100252344 LOC7473153 LOC18105020 LOC18099303 LOC25482112 LOC11426436 LOC123132188 LOC123105561 LOC123143725 LOC123402615 LOC123452895 LOC107960399 LOC107922270 LOC107909381 LOC106358336 LOC106390366 LOC106446216 LOC8057093 LOC102581490 LOC102595725 LOC102580955 LOC102616336 LOC102625999 LOC100822880 LOC100823140 LOC107761190 LOC107826729 LOC107803439
Function* uncharacterized protein Protein phosphatase 2C family protein Protein phosphatase 2C family protein probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 putative protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 80 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 80 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 probable protein phosphatase 2C 55 putative protein phosphatase 2C 55 putative protein phosphatase 2C 55 putative protein phosphatase 2C 55
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00620 Pyruvate metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00220 Arginine biosynthesis 2
sly00270 Cysteine and methionine metabolism 2
sly01240 Biosynthesis of cofactors 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00230 Purine metabolism 3
sly01240 Biosynthesis of cofactors 3
sly00220 Arginine biosynthesis 2
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00270 Cysteine and methionine metabolism 2
bra00480 Glutathione metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00770 Pantothenate and CoA biosynthesis 3
bra01210 2-Oxocarboxylic acid metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 6
bna00770 Pantothenate and CoA biosynthesis 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 8
bna00290 Valine, leucine and isoleucine biosynthesis 6
bna00770 Pantothenate and CoA biosynthesis 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03060 Protein export 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722118 827359 836805 100784475 100805475 100802359 101260900 101253704 101244356 4334524 100191645 103625788 103869374 103829575 100261557 100252344 7473153 18105020 18099303 25482112 11426436 123132188 123105561 123143725 123402615 123452895 107960399 107922270 107909381 106358336 106390366 106446216 8057093 102581490 102595725 102580955 102616336 102625999 100822880 100823140 107761190 107826729 107803439
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