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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g410000v5   uncharacterized protein 
 ath-u.5   AT2G26470   embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 
 gma-u.5   100806739   abasic site processing protein YoqW 
 osa-u.5   4341015   uncharacterized LOC4341015 
 zma-u.5   100277594   uncharacterized LOC100277594 
 vvi-u.5   100248598   uncharacterized LOC100248598 
 ppo-u.5   7459516   uncharacterized LOC7459516 
 mtr-u.5   11436955   abasic site processing protein YoqW 

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Top 50 coexpressed genes to CHLRE_09g410000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g410000v5 (cre-r.1 coexpression data)

CoexMap"5722266"


creCHLRE_09g410000v5 | Entrez gene ID : 5722266    
Species cre ath gma osa zma vvi ppo mtr sly sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006974 [list] [network] DNA damage response  (258 genes)  IEA  
GO CC
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
Protein XP_042921545.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_042921545.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_042921545.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g410000v5

.
ath-u.5
for
AT2G26470

.
gma-u.5
for
100806739

.
osa-u.5
for
4341015

.
zma-u.5
for
100277594

.
vvi-u.5
for
100248598

.
ppo-u.5
for
7459516

.
mtr-u.5
for
11436955

.


Ortholog ID: 11248
Species ath gma osa zma vvi ppo mtr tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol AT2G26470 LOC100806739 LOC4341015 LOC100277594 LOC100248598 LOC7459516 LOC11436955 LOC123136476 LOC123402206 LOC107955757 LOC121232282 LOC125578521 LOC106415433 CHLRE_09g410000v5 LOC110436044 LOC102620840 LOC100828822 LOC107768444 LOC107774706
Function* embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein abasic site processing protein YoqW uncharacterized LOC4341015 uncharacterized LOC100277594 uncharacterized LOC100248598 uncharacterized LOC7459516 abasic site processing protein YoqW abasic site processing protein HMCES abasic site processing protein HMCES abasic site processing protein YoqW abasic site processing protein YoqW abasic site processing protein YoqW-like abasic site processing protein YoqW uncharacterized protein embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein uncharacterized LOC102620840 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein uncharacterized LOC107768444 uncharacterized LOC107774706
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 6
nta03420 Nucleotide excision repair 6
nta03410 Base excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 6
nta03420 Nucleotide excision repair 6
nta03410 Base excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817188 100806739 4341015 100277594 100248598 7459516 11436955 123136476 123402206 107955757 121232282 125578521 106415433 5722266 110436044 102620840 100828822 107768444 107774706
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