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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g525500v5   uncharacterized protein 
 ath-u.5   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 gma-u.5   100795585   gamma-tubulin complex component 2 
 gma-u.5   100791588   gamma-tubulin complex component 2 
 sly-u.5   101262474   gamma-tubulin complex component 2 
 osa-u.5   4336312   gamma-tubulin complex component 2 
 zma-u.5   100274060   uncharacterized LOC100274060 
 vvi-u.5   100259303   gamma-tubulin complex component 2 
 ppo-u.5   7464601   gamma-tubulin complex component 2 
 mtr-u.5   11420686   gamma-tubulin complex component 2 

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Top 50 coexpressed genes to CHLRE_12g525500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g525500v5 (cre-r.1 coexpression data)

CoexMap"5722501"


creCHLRE_12g525500v5 | Entrez gene ID : 5722501    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007020 [list] [network] microtubule nucleation  (7 genes)  IEA  
GO:0031122 [list] [network] cytoplasmic microtubule organization  (14 genes)  IEA  
GO:0051225 [list] [network] spindle assembly  (14 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (46 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (160 genes)  IEA  
GO CC
GO:0008275 [list] [network] gamma-tubulin small complex  (4 genes)  IEA  
GO:0000923 [list] [network] equatorial microtubule organizing center  (5 genes)  IEA  
GO:0000922 [list] [network] spindle pole  (66 genes)  IEA  
GO:0005813 [list] [network] centrosome  (109 genes)  IEA  
GO MF
GO:0043015 [list] [network] gamma-tubulin binding  (6 genes)  IEA  
GO:0051011 [list] [network] microtubule minus-end binding  (6 genes)  IEA  
Protein XP_042918547.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_042918547.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_042918547.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g525500v5

.
ath-u.5
for
AT5G17410

.
gma-u.5
for
100795585

.
gma-u.5
for
100791588

.
sly-u.5
for
101262474

.
osa-u.5
for
4336312

.
zma-u.5
for
100274060

.
vvi-u.5
for
100259303

.
ppo-u.5
for
7464601

.
mtr-u.5
for
11420686

.


Ortholog ID: 9673
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G17410 LOC100791588 LOC100795585 LOC101262474 LOC4336312 LOC100274060 LOC103856248 LOC100259303 LOC7464601 LOC11420686 LOC123045942 LOC123189679 LOC123428620 LOC107922291 LOC107917978 LOC106386337 LOC125595081 CHLRE_12g525500v5 LOC8060214 LOC102593245 LOC102625766 LOC100824480 LOC107814503 LOC107810950
Function* Spc97 / Spc98 family of spindle pole body (SBP) component gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 uncharacterized LOC100274060 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2-like uncharacterized protein gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2-like gamma-tubulin complex component 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04081 Hormone signaling 2
tae04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04142 Lysosome 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04144 Endocytosis 3
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831607 100791588 100795585 101262474 4336312 100274060 103856248 100259303 7464601 11420686 123045942 123189679 123428620 107922291 107917978 106386337 125595081 5722501 8060214 102593245 102625766 100824480 107814503 107810950
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