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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g158750v5   uncharacterized protein 
 gma-u.5   100818387   DEAD-like helicases superfamily protein 
 gma-u.5   100787545   DEAD-box ATP-dependent RNA helicase 20 
 sly-u.5   101258585   DEAD-box ATP-dependent RNA helicase 20 
 vvi-u.5   100258635   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7464738   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7494659   ATP-dependent RNA helicase DBP2 
 mtr-u.5   25491103   DEAD-box ATP-dependent RNA helicase 20 

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Top 50 coexpressed genes to CHLRE_03g158750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g158750v5 (cre-r.1 coexpression data)

CoexMap"5723019"


creCHLRE_03g158750v5 | Entrez gene ID : 5723019      
Species cre gma sly vvi ppo mtr sbi nta bra osa hvu cit bdi sot zma tae ath bna ghi
Paralog 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042925782.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_nucl 3,  cyto_pero 3  (predict for XP_042925782.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_042925782.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g158750v5

.
gma-u.5
for
100818387

.
gma-u.5
for
100787545

.
sly-u.5
for
101258585

.
vvi-u.5
for
100258635

.
ppo-u.5
for
7464738

.
ppo-u.5
for
7494659

.
mtr-u.5
for
25491103

.


Ortholog ID: 14561
Species gma gma sly vvi ppo ppo mtr cre sot cit nta nta
Symbol LOC100787545 LOC100818387 LOC101258585 LOC100258635 LOC7494659 LOC7464738 LOC25491103 CHLRE_03g158750v5 LOC102596167 LOC102622298 LOC107770906 LOC107800451
Function* DEAD-box ATP-dependent RNA helicase 20 DEAD-like helicases superfamily protein DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 ATP-dependent RNA helicase DBP2 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 uncharacterized protein DEAD-box ATP-dependent RNA helicase 20-like ATP-dependent RNA helicase DBP2-like DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00906 Carotenoid biosynthesis 2
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 6
mtr00860 Porphyrin metabolism 5
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787545 100818387 101258585 100258635 7494659 7464738 25491103 5723019 102596167 102622298 107770906 107800451
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