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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g154425v5   uncharacterized protein 
 ath-u.5   CLASP   CLIP-associated protein 
 gma-u.5   100801377   CLIP-associated protein 
 gma-u.5   100796697   CLIP-associated protein 
 gma-u.5   100775793   CLIP-associated protein 
 sly-u.5   101260646   CLIP-associated protein-like 
 sly-u.5   101265274   CLIP-associated protein-like 
 osa-u.5   4336347   CLIP-associated protein 
 osa-u.5   4331138   CLIP-associated protein 
 osa-u.5   4329991   CLIP-associated protein 
 zma-u.5   103627891   CLIP-associated protein 
 zma-u.5   103642826   CLIP-associated protein 
 zma-u.5   103646242   CLIP-associated protein 
 vvi-u.5   100254930   CLIP-associated protein 
 ppo-u.5   7471196   CLIP-associated protein 
 mtr-u.5   11440470   CLIP-associated protein 
 mtr-u.5   25484157   CLIP-associated protein 

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Top 50 coexpressed genes to CHLRE_03g154425v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g154425v5 (cre-r.1 coexpression data)

CoexMap"5723084"


creCHLRE_03g154425v5 | Entrez gene ID : 5723084      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 2 3 3 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (174 genes)  IEA  
GO CC
GO:0005881 [list] [network] cytoplasmic microtubule  (12 genes)  IEA  
GO MF
GO:0008017 [list] [network] microtubule binding  (114 genes)  IEA  
Protein XP_001697468.1 [sequence] [blastp]
XP_042925699.1 [sequence] [blastp]
XP_042925700.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  nucl 1,  vacu 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_001697468.1)
chlo 8,  mito 1  (predict for XP_042925699.1)
E.R. 4,  E.R._plas 3,  nucl 1,  vacu 1,  plas 1,  cysk_nucl 1  (predict for XP_042925700.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001697468.1)
mito 6,  chlo 3  (predict for XP_042925699.1)
other 7  (predict for XP_042925700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g154425v5

.
ath-u.5
for
CLASP

.
gma-u.5
for
100801377

.
gma-u.5
for
100796697

.
gma-u.5
for
100775793

.
sly-u.5
for
101260646

.
sly-u.5
for
101265274

.
osa-u.5
for
4336347

.
osa-u.5
for
4331138

.
osa-u.5
for
4329991

.
zma-u.5
for
103627891

.
zma-u.5
for
103642826

.
zma-u.5
for
103646242

.
vvi-u.5
for
100254930

.
ppo-u.5
for
7471196

.
mtr-u.5
for
11440470

.
mtr-u.5
for
25484157

.


Ortholog ID: 2613
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit bdi bdi nta nta
Symbol CLASP LOC100796697 LOC100820523 LOC101260646 LOC101265274 LOC4329991 LOC4331138 LOC103646242 LOC103627891 LOC103837994 LOC108870350 LOC100254930 LOC7471196 LOC11440470 LOC25484157 LOC123053856 LOC123045982 LOC123403800 LOC123427199 LOC107890436 LOC107925864 LOC106414904 LOC106368831 CHLRE_03g154425v5 CHLRE_06g278219v5 LOC8061883 LOC8084710 LOC102583830 LOC102584952 LOC102621123 LOC100843375 LOC100829320 LOC107788562 LOC107821432
Function* CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein-like uncharacterized protein uncharacterized protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 2
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04144 Endocytosis 3
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot04145 Phagosome 2
sot04517 IgSF CAM signaling 2
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 2
sot04517 IgSF CAM signaling 2
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816539 100796697 100820523 101260646 101265274 4329991 4331138 103646242 103627891 103837994 108870350 100254930 7471196 11440470 25484157 123053856 123045982 123403800 123427199 107890436 107925864 106414904 106368831 5723084 5723625 8061883 8084710 102583830 102584952 102621123 100843375 100829320 107788562 107821432
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