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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g406200v5   uncharacterized protein 
 ath-u.5   OVA6   Class II aaRS and biotin synthetases superfamily protein 
 gma-u.5   100815508   proline--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100788013   proline--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101250341   proline--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4342480   proline--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100283555   prolyl-tRNA synthetase 
 vvi-u.5   100262997   proline--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18106518   proline--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11420887   proline--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to CHLRE_09g406200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g406200v5 (cre-r.1 coexpression data)

CoexMap"5723217"


creCHLRE_09g406200v5 | Entrez gene ID : 5723217    
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00970 [list] [network] Aminoacyl-tRNA biosynthesis (65 genes)
GO BP
GO:0006433 [list] [network] prolyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0017101 [list] [network] aminoacyl-tRNA synthetase multienzyme complex  (5 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0004827 [list] [network] proline-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042921465.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  pero 1  (predict for XP_042921465.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_042921465.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g406200v5

.
ath-u.5
for
OVA6

.
gma-u.5
for
100815508

.
gma-u.5
for
100788013

.
sly-u.5
for
101250341

.
osa-u.5
for
4342480

.
zma-u.5
for
100283555

.
vvi-u.5
for
100262997

.
ppo-u.5
for
18106518

.
mtr-u.5
for
11420887

.


Ortholog ID: 10387
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol OVA6 LOC100788013 LOC100815508 LOC101250341 LOC4342480 LOC100283555 LOC103852093 LOC100262997 LOC18106518 LOC11420887 LOC123052811 LOC123045023 LOC123426192 LOC107943355 LOC121224389 LOC106391433 LOC106418152 CHLRE_09g406200v5 LOC8081162 LOC102597850 LOC102610532 LOC100829224 LOC107807876 LOC107779488
Function* Class II aaRS and biotin synthetases superfamily protein proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial prolyl-tRNA synthetase proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial proline--tRNA ligase, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly00340 Histidine metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma00860 Porphyrin metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
bra00970 Aminoacyl-tRNA biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 11
tae00450 Selenocompound metabolism 3
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae00450 Selenocompound metabolism 4
tae00620 Pyruvate metabolism 2
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu03010 Ribosome 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 7
cre03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 6
bdi01240 Biosynthesis of cofactors 3
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta01240 Biosynthesis of cofactors 3
nta00450 Selenocompound metabolism 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835328 100788013 100815508 101250341 4342480 100283555 103852093 100262997 18106518 11420887 123052811 123045023 123426192 107943355 121224389 106391433 106418152 5723217 8081162 102597850 102610532 100829224 107807876 107779488
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