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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g406851v5   uncharacterized protein 
 ath-u.5   CCS52A2   cell cycle switch protein 52 A2 
 ath-u.5   FZR2   FIZZY-related 2 
 ath-u.5   FZR3   FIZZY-related 3 
 gma-u.5   CCS52   WD-repeat cell cycle regulatory protein 
 gma-u.5   100780928   protein FIZZY-RELATED 2 
 gma-u.5   100785726   protein FIZZY-RELATED 2 
 sly-u.5   101257937   B-type cell cycle switch protein ccs52A-like 
 sly-u.5   ccs52B   cell cycle switch 52B 
 sly-u.5   ccs52A   protein FIZZY-RELATED 2 
 osa-u.5   4326397   protein FIZZY-RELATED 3 
 osa-u.5   4331448   protein FIZZY-RELATED 2 
 zma-u.5   103631177   protein FIZZY-RELATED 2 
 zma-u.5   100193750   uncharacterized LOC100193750 
 zma-u.5   100384147   uncharacterized LOC100384147 
 vvi-u.5   100256403   B-type cell cycle switch protein ccs52A 
 vvi-u.5   100252996   protein FIZZY-RELATED 3 
 ppo-u.5   7465828   protein FIZZY-RELATED 2 
 ppo-u.5   7483958   protein FIZZY-RELATED 3 
 ppo-u.5   7487965   protein FIZZY-RELATED 3 
 mtr-u.5   25489317   protein FIZZY-RELATED 3 
 mtr-u.5   25493638   protein FIZZY-RELATED 1 

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Top 50 coexpressed genes to CHLRE_09g406851v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g406851v5 (cre-r.1 coexpression data)

CoexMap"5723227"


creCHLRE_09g406851v5 | Entrez gene ID : 5723227    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04120 [list] [network] Ubiquitin mediated proteolysis (48 genes)
GO BP
GO:1904668 [list] [network] positive regulation of ubiquitin protein ligase activity  (2 genes)  IEA  
GO:1905786 [list] [network] positive regulation of anaphase-promoting complex-dependent catabolic process  (2 genes)  IEA  
GO:0031145 [list] [network] anaphase-promoting complex-dependent catabolic process  (7 genes)  IEA  
GO CC
GO:0005680 [list] [network] anaphase-promoting complex  (10 genes)  IEA  
GO MF
GO:0010997 [list] [network] anaphase-promoting complex binding  (2 genes)  IEA  
GO:1990757 [list] [network] ubiquitin ligase activator activity  (2 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042921485.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  mito 1,  chlo 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for XP_042921485.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042921485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g406851v5

.
ath-u.5
for
CCS52A2

.
ath-u.5
for
FZR2

.
ath-u.5
for
FZR3

.
gma-u.5
for
CCS52

.
gma-u.5
for
100780928

.
gma-u.5
for
100785726

.
sly-u.5
for
101257937

.
sly-u.5
for
ccs52B

.
sly-u.5
for
ccs52A

.
osa-u.5
for
4326397

.
osa-u.5
for
4331448

.
zma-u.5
for
103631177

.
zma-u.5
for
100193750

.
zma-u.5
for
100384147

.
vvi-u.5
for
100256403

.
vvi-u.5
for
100252996

.
ppo-u.5
for
7465828

.
ppo-u.5
for
7483958

.
ppo-u.5
for
7487965

.
mtr-u.5
for
25489317

.
mtr-u.5
for
25493638

.


Ortholog ID: 1809
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol CCS52A2 FZR2 LOC100785726 LOC100797791 ccs52B LOC4331448 LOC4326397 LOC103631177 LOC100384147 LOC103861345 LOC103856035 LOC100252996 LOC100256403 LOC7483958 LOC18094431 LOC25493638 LOC25489317 LOC123093764 LOC123080994 LOC123441165 LOC123449875 LOC107936425 LOC107896490 LOC106440470 LOC106367019 CHLRE_09g406851v5 LOC8077965 LOC8078056 LOC102598464 LOC102598991 LOC102625617 LOC102621418 LOC100839038 LOC106866858 LOC107776364 LOC107818617
Function* cell cycle switch protein 52 A2 FIZZY-related 2 protein FIZZY-RELATED 2 protein FIZZY-RELATED 2 cell cycle switch 52B protein FIZZY-RELATED 2 protein FIZZY-RELATED 3 protein FIZZY-RELATED 2 uncharacterized LOC100384147 protein FIZZY-RELATED 2 protein FIZZY-RELATED 3 protein FIZZY-RELATED 3 B-type cell cycle switch protein ccs52A protein FIZZY-RELATED 3 protein FIZZY-RELATED 2 protein FIZZY-RELATED 1 protein FIZZY-RELATED 3 protein FIZZY-RELATED 2 protein FIZZY-RELATED 3 protein FIZZY-RELATED 3 protein FIZZY-RELATED 2-like protein FIZZY-RELATED 2 protein FIZZY-RELATED 2 protein FIZZY-RELATED 2 protein FIZZY-RELATED 1 uncharacterized protein protein FIZZY-RELATED 2 protein FIZZY-RELATED 3 protein FIZZY-RELATED 2-like protein FIZZY-RELATED 2-like protein FIZZY-RELATED 2-like protein FIZZY-RELATED 3 protein FIZZY-RELATED 2 protein FIZZY-RELATED 2-like B-type cell cycle switch protein ccs52B-like B-type cell cycle switch protein ccs52A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03030 DNA replication 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae01240 Biosynthesis of cofactors 3
tae00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01250 Biosynthesis of nucleotide sugars 5
cre00541 Biosynthesis of various nucleotide sugars 4
cre00520 Amino sugar and nucleotide sugar metabolism 3
cre00040 Pentose and glucuronate interconversions 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot00190 Oxidative phosphorylation 2
sot04145 Phagosome 2
sot04120 Ubiquitin mediated proteolysis 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot04145 Phagosome 4
sot00520 Amino sugar and nucleotide sugar metabolism 4
sot01250 Biosynthesis of nucleotide sugars 4
sot04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04142 Lysosome 2
nta00510 N-Glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826799 828390 100785726 100797791 101260349 4331448 4326397 103631177 100384147 103861345 103856035 100252996 100256403 7483958 18094431 25493638 25489317 123093764 123080994 123441165 123449875 107936425 107896490 106440470 106367019 5723227 8077965 8078056 102598464 102598991 102625617 102621418 100839038 106866858 107776364 107818617
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