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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g278269v5   uncharacterized protein 
 ath-u.5   EMB2773   PHD finger family protein 
 gma-u.5   100797795   sister chromatid cohesion protein SCC2 
 gma-u.5   100792021   sister chromatid cohesion protein SCC2 
 sly-u.5   101259220   sister chromatid cohesion protein SCC2 
 osa-u.5   4342227   sister chromatid cohesion protein SCC2 
 zma-u.5   103648287   sister chromatid cohesion protein SCC2 
 zma-u.5   103631880   sister chromatid cohesion protein SCC2 
 vvi-u.5   100249183   sister chromatid cohesion protein SCC2 
 ppo-u.5   7484570   sister chromatid cohesion protein SCC2 
 mtr-u.5   11413944   sister chromatid cohesion protein SCC2 

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Top 50 coexpressed genes to CHLRE_06g278269v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g278269v5 (cre-r.1 coexpression data)

CoexMap"5723604"


creCHLRE_06g278269v5 | Entrez gene ID : 5723604    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034087 [list] [network] establishment of mitotic sister chromatid cohesion  (2 genes)  IEA  
GO:0071169 [list] [network] establishment of protein localization to chromatin  (2 genes)  IEA  
GO:1990414 [list] [network] replication-born double-strand break repair via sister chromatid exchange  (6 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (624 genes)  IEA  
GO CC
GO:0090694 [list] [network] Scc2-Scc4 cohesin loading complex  (2 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (81 genes)  IEA  
Protein XP_042923888.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto 1,  chlo 1,  mito 1,  vacu 1,  cyto_nucl 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_042923888.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042923888.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g278269v5

.
ath-u.5
for
EMB2773

.
gma-u.5
for
100797795

.
gma-u.5
for
100792021

.
sly-u.5
for
101259220

.
osa-u.5
for
4342227

.
zma-u.5
for
103648287

.
zma-u.5
for
103631880

.
vvi-u.5
for
100249183

.
ppo-u.5
for
7484570

.
mtr-u.5
for
11413944

.


Ortholog ID: 7333
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB2773 LOC100797795 LOC100792021 LOC101259220 LOC4342227 LOC103631880 LOC103846405 LOC103850988 LOC100249183 LOC7484570 LOC11413944 LOC123045123 LOC123052958 LOC123426364 LOC107892383 LOC107888544 LOC125575693 LOC106372161 CHLRE_06g278269v5 LOC8054523 LOC102592080 LOC102628065 LOC100829557 LOC107812928 LOC107798080
Function* PHD finger family protein sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2-like sister chromatid cohesion protein SCC2 uncharacterized protein nipped-B-like protein B nipped-B-like protein B sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2 sister chromatid cohesion protein SCC2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03250 Viral life cycle - HIV-1 3
tae00310 Lysine degradation 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03022 Basal transcription factors 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 3
nta04382 Cornified envelope formation 3
nta03022 Basal transcription factors 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831407 100797795 100792021 101259220 4342227 103631880 103846405 103850988 100249183 7484570 11413944 123045123 123052958 123426364 107892383 107888544 125575693 106372161 5723604 8054523 102592080 102628065 100829557 107812928 107798080
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