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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g453900v5   uncharacterized protein 
 ath-u.5   CYP71   cyclophilin71 
 gma-u.5   CYP35   peptidyl-prolyl cis-trans isomerase CYP35 
 gma-u.5   CYP20   peptidyl-prolyl cis-trans isomerase CYP20 
 sly-u.5   101253156   peptidyl-prolyl cis-trans isomerase CYP71 
 osa-u.5   4346298   peptidyl-prolyl cis-trans isomerase CYP71 
 zma-u.5   100383118   Putative peptidyl-prolyl cis-trans isomerase and WD40 repeat domain family protein 
 vvi-u.5   100263690   peptidyl-prolyl cis-trans isomerase CYP71 
 ppo-u.5   7474941   peptidyl-prolyl cis-trans isomerase CYP71 
 mtr-u.5   25487531   peptidyl-prolyl cis-trans isomerase CYP71 

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Top 50 coexpressed genes to CHLRE_10g453900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g453900v5 (cre-r.1 coexpression data)

CoexMap"5724088"


creCHLRE_10g453900v5 | Entrez gene ID : 5724088      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (33 genes)  IEA  
GO:0006457 [list] [network] protein folding  (108 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042920415.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for XP_042920415.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042920415.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g453900v5

.
ath-u.5
for
CYP71

.
gma-u.5
for
CYP35

.
gma-u.5
for
CYP20

.
sly-u.5
for
101253156

.
osa-u.5
for
4346298

.
zma-u.5
for
100383118

.
vvi-u.5
for
100263690

.
ppo-u.5
for
7474941

.
mtr-u.5
for
25487531

.


Ortholog ID: 10128
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CYP71 CYP35 CYP20 LOC101253156 LOC4346298 LOC100383118 LOC103873657 LOC100263690 LOC7474941 LOC25487531 LOC123152702 LOC123158890 LOC123411244 LOC107961710 LOC107953282 LOC106347668 LOC106396902 CHLRE_10g453900v5 LOC8057995 LOC102599272 LOC102609935 LOC100823393 LOC107770880 LOC107780916
Function* cyclophilin71 peptidyl-prolyl cis-trans isomerase CYP35 peptidyl-prolyl cis-trans isomerase CYP20 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 Putative peptidyl-prolyl cis-trans isomerase and WD40 repeat domain family protein peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 uncharacterized protein peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71 peptidyl-prolyl cis-trans isomerase CYP71
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823585 100801887 100792207 101253156 4346298 100383118 103873657 100263690 7474941 25487531 123152702 123158890 123411244 107961710 107953282 106347668 106396902 5724088 8057995 102599272 102609935 100823393 107770880 107780916
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