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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g456700v5   uncharacterized protein 
 ath-u.5   AT1G80000   CASC3/Barentsz eIF4AIII binding protein 
 gma-u.5   100816837   protein MLN51 homolog 
 gma-u.5   100796971   protein MLN51 homolog 
 gma-u.5   100792594   protein MLN51 homolog 
 sly-u.5   101247414   protein MLN51 homolog 
 sly-u.5   101264103   protein MLN51 homolog 
 osa-u.5   4324698   uncharacterized LOC4324698 
 osa-u.5   4326389   protein MLN51 homolog 
 osa-u.5   4339434   protein MLN51 homolog 
 zma-u.5   100193574   uncharacterized LOC100193574 
 zma-u.5   100382646   uncharacterized LOC100382646 
 zma-u.5   103635880   CASC3/Barentsz eIF4AIII binding 
 vvi-u.5   100256571   protein MLN51 homolog 
 ppo-u.5   18094746   protein MLN51 homolog 
 ppo-u.5   7478385   protein MLN51 homolog 
 mtr-u.5   25491383   protein MLN51 homolog 

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Top 50 coexpressed genes to CHLRE_10g456700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g456700v5 (cre-r.1 coexpression data)

CoexMap"5724110"


creCHLRE_10g456700v5 | Entrez gene ID : 5724110    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 3 2 3 3 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (143 genes)  IEA  
GO CC
GO:0035145 [list] [network] exon-exon junction complex  (5 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
Protein XP_042920471.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042920471.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_042920471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g456700v5

.
ath-u.5
for
AT1G80000

.
gma-u.5
for
100816837

.
gma-u.5
for
100796971

.
gma-u.5
for
100792594

.
sly-u.5
for
101247414

.
sly-u.5
for
101264103

.
osa-u.5
for
4324698

.
osa-u.5
for
4326389

.
osa-u.5
for
4339434

.
zma-u.5
for
100193574

.
zma-u.5
for
100382646

.
zma-u.5
for
103635880

.
vvi-u.5
for
100256571

.
ppo-u.5
for
18094746

.
ppo-u.5
for
7478385

.
mtr-u.5
for
25491383

.


Ortholog ID: 3641
Species ath gma gma sly sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT1G80000 LOC100792594 LOC100796971 LOC101247414 LOC101264103 LOC4324698 LOC4339434 LOC100193574 LOC103635880 LOC103836036 LOC100256571 LOC7478385 LOC18094746 LOC25491383 LOC123064344 LOC123070046 LOC123443820 LOC123448494 LOC107951897 LOC121206098 LOC106366560 LOC106353351 CHLRE_10g456700v5 LOC8082485 LOC8068978 LOC102597201 LOC102601682 LOC102612593 LOC100839993 LOC100834495 LOC107783779 LOC107801981
Function* CASC3/Barentsz eIF4AIII binding protein protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog uncharacterized LOC4324698 protein MLN51 homolog uncharacterized LOC100193574 CASC3/Barentsz eIF4AIII binding protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog uncharacterized protein uncharacterized LOC8082485 protein CASC3 uncharacterized LOC102597201 protein CASC3 protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog protein MLN51 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03250 Viral life cycle - HIV-1 3
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03015 mRNA surveillance pathway 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844340 100792594 100796971 101247414 101264103 4324698 4339434 100193574 103635880 103836036 100256571 7478385 18094746 25491383 123064344 123070046 123443820 123448494 107951897 121206098 106366560 106353351 5724110 8082485 8068978 102597201 102601682 102612593 100839993 100834495 107783779 107801981
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