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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g467630v5   uncharacterized protein 
 ath-u.5   AMI1   amidase 1 
 gma-u.5   100807674   amidase 1 
 gma-u.5   100780821   amidase 1 
 sly-u.5   104644402   amidase 1 
 osa-u.5   4334958   amidase 1-like 
 osa-u.5   4334956   amidase 1-like 
 zma-u.5   100384731   Amidase 1 
 vvi-u.5   100240917   amidase 1 
 ppo-u.5   7481767   amidase 1 
 mtr-u.5   11406438   amidase 1 

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Top 50 coexpressed genes to CHLRE_11g467630v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g467630v5 (cre-r.1 coexpression data)

CoexMap"5724366"


creCHLRE_11g467630v5 | Entrez gene ID : 5724366    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00330 [list] [network] Arginine and proline metabolism (38 genes)
cre00360 [list] [network] Phenylalanine metabolism (14 genes)
cre00380 [list] [network] Tryptophan metabolism (15 genes)
GO BP
GO CC
GO MF
Protein XP_042919382.1 [sequence] [blastp]
XP_042919383.1 [sequence] [blastp]
XP_042919384.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_042919382.1)
mito 6,  chlo 4  (predict for XP_042919383.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_042919384.1)
Subcellular
localization
TargetP
mito 9,  chlo 4  (predict for XP_042919382.1)
mito 9,  chlo 4  (predict for XP_042919383.1)
mito 9,  chlo 4  (predict for XP_042919384.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g467630v5

.
ath-u.5
for
AMI1

.
gma-u.5
for
100807674

.
gma-u.5
for
100780821

.
sly-u.5
for
104644402

.
osa-u.5
for
4334958

.
osa-u.5
for
4334956

.
zma-u.5
for
100384731

.
vvi-u.5
for
100240917

.
ppo-u.5
for
7481767

.
mtr-u.5
for
11406438

.


Ortholog ID: 7785
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AMI1 LOC100780821 LOC100807674 LOC104644402 LOC4334956 LOC4334958 LOC100384731 LOC103843366 LOC100240917 LOC7481767 LOC11406438 LOC123047495 LOC123050856 LOC123431360 LOC107939337 LOC107887653 LOC106377010 LOC106420154 CHLRE_11g467630v5 LOC8079206 LOC102584904 LOC127898583 LOC102630626 LOC100844843 LOC107776547 LOC107807935
Function* amidase 1 amidase 1 amidase 1 amidase 1 amidase 1-like amidase 1-like Amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 amidase 1 uncharacterized protein amidase 1 amidase 1 amidase 1-like amidase 1 amidase 1 amidase 1-like amidase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00360 Phenylalanine metabolism 2
gma00380 Tryptophan metabolism 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma00330 Arginine and proline metabolism 2
gma00360 Phenylalanine metabolism 2
gma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 7
sly00196 Photosynthesis - antenna proteins 5
sly00860 Porphyrin metabolism 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa04146 Peroxisome 2
osa00260 Glycine, serine and threonine metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00790 Folate biosynthesis 3
bra03010 Ribosome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 3
mtr01200 Carbon metabolism 3
mtr01230 Biosynthesis of amino acids 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 2
hvu00620 Pyruvate metabolism 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
hvu00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 4
ghi00330 Arginine and proline metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
ghi00051 Fructose and mannose metabolism 5
ghi00330 Arginine and proline metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00460 Cyanoamino acid metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01200 Carbon metabolism 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00460 Cyanoamino acid metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01200 Carbon metabolism 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
cit00330 Arginine and proline metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00330 Arginine and proline metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837418 100780821 100807674 104644402 4334956 4334958 100384731 103843366 100240917 7481767 11406438 123047495 123050856 123431360 107939337 107887653 106377010 106420154 5724366 8079206 102584904 127898583 102630626 100844843 107776547 107807935
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