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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g688302v5   uncharacterized protein 
 ath-u.5   AT5G66050   Wound-responsive family protein 
 ath-u.5   AT1G19660   Wound-responsive family protein 
 ath-u.5   BBD1   bifunctional nuclease in basal defense response 1 
 gma-u.5   100807950   bifunctional nuclease 1 
 gma-u.5   100775199   bifunctional nuclease 1 
 gma-u.5   100801243   bifunctional nuclease 2 
 sly-u.5   101263903   bifunctional nuclease 2 
 sly-u.5   101247280   bifunctional nuclease 2 
 sly-u.5   101247196   bifunctional nuclease 1 
 osa-u.5   4326932   bifunctional nuclease 1-like 
 osa-u.5   4345362   bifunctional nuclease 2-like 
 zma-u.5   103652143   bifunctional nuclease 2 
 zma-u.5   103634274   bifunctional nuclease 2 
 zma-u.5   100280101   uncharacterized LOC100280101 
 vvi-u.5   100855103   bifunctional nuclease 2 
 vvi-u.5   100855204   bifunctional nuclease 2 
 ppo-u.5   7479727   bifunctional nuclease 1 
 ppo-u.5   18099114   bifunctional nuclease 2 
 mtr-u.5   25482175   bifunctional nuclease 1 
 mtr-u.5   25490215   bifunctional nuclease 1 
 mtr-u.5   11425357   bifunctional nuclease 2 

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Top 50 coexpressed genes to CHLRE_16g688302v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g688302v5 (cre-r.1 coexpression data)

CoexMap"5724399"


creCHLRE_16g688302v5 | Entrez gene ID : 5724399      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (136 genes)  IEA  
GO CC
GO:0030891 [list] [network] VCB complex  (5 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004518 [list] [network] nuclease activity  (123 genes)  IEA  
Protein XP_001698912.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_001698912.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_001698912.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g688302v5

.
ath-u.5
for
AT5G66050

.
ath-u.5
for
AT1G19660

.
ath-u.5
for
BBD1

.
gma-u.5
for
100807950

.
gma-u.5
for
100775199

.
gma-u.5
for
100801243

.
sly-u.5
for
101263903

.
sly-u.5
for
101247280

.
sly-u.5
for
101247196

.
osa-u.5
for
4326932

.
osa-u.5
for
4345362

.
zma-u.5
for
103652143

.
zma-u.5
for
103634274

.
zma-u.5
for
100280101

.
vvi-u.5
for
100855103

.
vvi-u.5
for
100855204

.
ppo-u.5
for
7479727

.
ppo-u.5
for
18099114

.
mtr-u.5
for
25482175

.
mtr-u.5
for
25490215

.
mtr-u.5
for
11425357

.


Ortholog ID: 2106
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol BBD1 AT5G66050 LOC100807950 LOC100775199 LOC101263903 LOC101247280 LOC4345362 LOC4326932 LOC100280101 LOC103652143 LOC103852946 LOC103837664 LOC100855103 LOC100855204 LOC18099114 LOC25490215 LOC11425357 LOC123146876 LOC123139254 LOC123404035 LOC123407505 LOC107943432 LOC107895571 LOC106397218 LOC106362746 CHLRE_16g688302v5 LOC110436962 LOC110429846 LOC102600753 LOC102591631 LOC102607680 LOC102622452 LOC100846274 LOC100830958 LOC107795746 LOC107808046
Function* bifunctional nuclease in basal defense response 1 Wound-responsive family protein bifunctional nuclease 1 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 2-like bifunctional nuclease 1-like uncharacterized LOC100280101 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease bifunctional nuclease-like bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2-like uncharacterized protein bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2-like bifunctional nuclease 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 4
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ppo00999 Biosynthesis of various plant secondary metabolites 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 7
tae01200 Carbon metabolism 7
tae00260 Glycine, serine and threonine metabolism 6
tae01230 Biosynthesis of amino acids 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00730 Thiamine metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843874 836735 100807950 100775199 101263903 101247280 4345362 4326932 100280101 103652143 103852946 103837664 100855103 100855204 18099114 25490215 11425357 123146876 123139254 123404035 123407505 107943432 107895571 106397218 106362746 5724399 110436962 110429846 102600753 102591631 102607680 102622452 100846274 100830958 107795746 107808046
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