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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g684155v5   uncharacterized protein 
 ath-u.5   AT2G44580   zinc ion binding protein 
 gma-u.5   100817511   sister chromatid cohesion protein DCC1 
 gma-u.5   100807595   sister chromatid cohesion protein DCC1 
 sly-u.5   101267349   uncharacterized LOC101267349 
 osa-u.5   4337640   uncharacterized LOC4337640 
 zma-u.5   100216608   uncharacterized LOC100216608 
 vvi-u.5   100243575   uncharacterized LOC100243575 
 ppo-u.5   7487867   uncharacterized LOC7487867 
 mtr-u.5   25480294   sister chromatid cohesion protein DCC1 

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Top 50 coexpressed genes to CHLRE_16g684155v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g684155v5 (cre-r.1 coexpression data)

CoexMap"5724477"


creCHLRE_16g684155v5 | Entrez gene ID : 5724477      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034088 [list] [network] maintenance of mitotic sister chromatid cohesion  (2 genes)  IEA  
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (15 genes)  IEA  
GO CC
GO:0031390 [list] [network] Ctf18 RFC-like complex  (2 genes)  IEA  
GO:0000775 [list] [network] chromosome, centromeric region  (19 genes)  IEA  
GO:0000785 [list] [network] chromatin  (219 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_001698866.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for XP_001698866.2)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_001698866.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g684155v5

.
ath-u.5
for
AT2G44580

.
gma-u.5
for
100817511

.
gma-u.5
for
100807595

.
sly-u.5
for
101267349

.
osa-u.5
for
4337640

.
zma-u.5
for
100216608

.
vvi-u.5
for
100243575

.
ppo-u.5
for
7487867

.
mtr-u.5
for
25480294

.


Ortholog ID: 10046
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G44580 LOC100817511 LOC100807595 LOC101267349 LOC4337640 LOC100216608 LOC103866813 LOC100243575 LOC7487867 LOC25480294 LOC123114270 LOC123123754 LOC123399496 LOC107936368 LOC107931848 LOC106450787 LOC106394345 CHLRE_16g684155v5 LOC8080165 LOC102578670 LOC102609122 LOC100829986 LOC107778615 LOC107766416
Function* zinc ion binding protein sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 uncharacterized LOC101267349 uncharacterized LOC4337640 uncharacterized LOC100216608 sister chromatid cohesion protein DCC1 uncharacterized LOC100243575 uncharacterized LOC7487867 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1-like sister chromatid cohesion protein DCC1-like uncharacterized protein sister chromatid cohesion protein DCC1 sister chromatid cohesion protein DCC1 uncharacterized LOC102609122 sister chromatid cohesion protein DCC1 uncharacterized LOC107778615 uncharacterized LOC107766416
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 6
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 5
gma03440 Homologous recombination 5
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03050 Proteasome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 6
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03430 Mismatch repair 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03430 Mismatch repair 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 9
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819066 100817511 100807595 101267349 4337640 100216608 103866813 100243575 7487867 25480294 123114270 123123754 123399496 107936368 107931848 106450787 106394345 5724477 8080165 102578670 102609122 100829986 107778615 107766416
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