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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g610663v5   uncharacterized protein 
 ath-u.5   AT5G25800   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100802793   small RNA degrading nuclease 5 
 gma-u.5   100796963   small RNA degrading nuclease 5 
 sly-u.5   101258362   small RNA degrading nuclease 5 
 osa-u.5   9269093   small RNA degrading nuclease 5 
 zma-u.5   100383366   Small RNA degrading nuclease 5 
 zma-u.5   100501283   uncharacterized LOC100501283 
 vvi-u.5   100242014   small RNA degrading nuclease 5 
 ppo-u.5   7469197   small RNA degrading nuclease 5 
 mtr-u.5   25482424   small RNA degrading nuclease 5 

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Top 50 coexpressed genes to CHLRE_14g610663v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g610663v5 (cre-r.1 coexpression data)

CoexMap"5724570"


creCHLRE_14g610663v5 | Entrez gene ID : 5724570    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004527 [list] [network] exonuclease activity  (61 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042916650.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  cyto_pero 1  (predict for XP_042916650.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042916650.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g610663v5

.
ath-u.5
for
AT5G25800

.
gma-u.5
for
100802793

.
gma-u.5
for
100796963

.
sly-u.5
for
101258362

.
osa-u.5
for
9269093

.
zma-u.5
for
100383366

.
zma-u.5
for
100501283

.
vvi-u.5
for
100242014

.
ppo-u.5
for
7469197

.
mtr-u.5
for
25482424

.


Ortholog ID: 7737
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G25800 LOC100796963 LOC100802793 LOC101258362 LOC9269093 LOC100501283 LOC100383366 LOC103854733 LOC100242014 LOC7469197 LOC25482424 LOC123079355 LOC123062223 LOC123444547 LOC107910416 LOC107952030 LOC106348551 LOC106382657 CHLRE_14g610663v5 LOC110429827 LOC102601294 LOC102612254 LOC100836381 LOC107796462 LOC107815163
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 uncharacterized LOC100501283 Small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5-like small RNA degrading nuclease 5-like uncharacterized protein small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma04120 Ubiquitin mediated proteolysis 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 4
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832649 100796963 100802793 101258362 9269093 100501283 100383366 103854733 100242014 7469197 25482424 123079355 123062223 123444547 107910416 107952030 106348551 106382657 5724570 110429827 102601294 102612254 100836381 107796462 107815163
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