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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g670250v5   uncharacterized protein 
 ath-u.5   TRO   TRAUCO 
 gma-u.5   100816796   protein TRAUCO 
 gma-u.5   100796715   protein TRAUCO 
 sly-u.5   101243859   protein TRAUCO 
 osa-u.5   9268228   protein TRAUCO 
 osa-u.5   4349761   protein TRAUCO 
 zma-u.5   103631512   protein TRAUCO 
 zma-u.5   100192531   uncharacterized LOC100192531 
 vvi-u.5   100255238   protein TRAUCO 
 ppo-u.5   7485742   protein TRAUCO 
 ppo-u.5   7482332   protein TRAUCO 
 mtr-u.5   11442855   protein TRAUCO 

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Top 50 coexpressed genes to CHLRE_16g670250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g670250v5 (cre-r.1 coexpression data)

CoexMap"5724730"


creCHLRE_16g670250v5 | Entrez gene ID : 5724730      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (6 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (112 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042915806.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_042915806.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_042915806.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g670250v5

.
ath-u.5
for
TRO

.
gma-u.5
for
100816796

.
gma-u.5
for
100796715

.
sly-u.5
for
101243859

.
osa-u.5
for
9268228

.
osa-u.5
for
4349761

.
zma-u.5
for
103631512

.
zma-u.5
for
100192531

.
vvi-u.5
for
100255238

.
ppo-u.5
for
7485742

.
ppo-u.5
for
7482332

.
mtr-u.5
for
11442855

.


Ortholog ID: 6420
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TRO LOC100796715 LOC100816796 LOC101243859 LOC9268228 LOC4349761 LOC100192531 LOC103631512 LOC103871284 LOC100255238 LOC7485742 LOC7482332 LOC11442855 LOC123111212 LOC123103039 LOC123453107 LOC107889322 LOC107891419 LOC106346064 LOC106389745 CHLRE_16g670250v5 LOC8069301 LOC102592430 LOC102613335 LOC100829546 LOC107832330 LOC107828915
Function* TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO uncharacterized LOC100192531 protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO-like protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO uncharacterized protein protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO-like protein TRAUCO
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi04120 Ubiquitin mediated proteolysis 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi04120 Ubiquitin mediated proteolysis 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00640 Propanoate metabolism 2
cit01200 Carbon metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841570 100796715 100816796 101243859 9268228 4349761 100192531 103631512 103871284 100255238 7485742 7482332 11442855 123111212 123103039 123453107 107889322 107891419 106346064 106389745 5724730 8069301 102592430 102613335 100829546 107832330 107828915
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