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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g688750v5   uncharacterized protein 
 ath-u.5   SMU2   RED family protein 
 gma-u.5   100775354   suppressor of mec-8 and unc-52 protein homolog 2 
 gma-u.5   100526981   suppressor of mec-8 and unc-52 protein homolog 2 
 sly-u.5   101259647   suppressor of mec-8 and unc-52 protein homolog 2 
 osa-u.5   4349762   suppressor of mec-8 and unc-52 protein homolog 2 
 zma-u.5   103651660   suppressor of mec-8 and unc-52 protein homolog 2 
 zma-u.5   100037818   suppressors of mec-8 and unc-52 
 vvi-u.5   100264670   suppressor of mec-8 and unc-52 protein homolog 2 
 ppo-u.5   7490528   suppressor of mec-8 and unc-52 protein homolog 2 
 mtr-u.5   25486582   suppressor of mec-8 and unc-52 protein homolog 2 

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Top 50 coexpressed genes to CHLRE_16g688750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g688750v5 (cre-r.1 coexpression data)

CoexMap"5724812"


creCHLRE_16g688750v5 | Entrez gene ID : 5724812    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042915766.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_042915766.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_042915766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g688750v5

.
ath-u.5
for
SMU2

.
gma-u.5
for
100775354

.
gma-u.5
for
100526981

.
sly-u.5
for
101259647

.
osa-u.5
for
4349762

.
zma-u.5
for
103651660

.
zma-u.5
for
100037818

.
vvi-u.5
for
100264670

.
ppo-u.5
for
7490528

.
mtr-u.5
for
25486582

.


Ortholog ID: 8889
Species ath gma gma sly osa zma zma vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol SMU2 LOC100526981 LOC100775354 LOC101259647 LOC4349762 LOC103651660 LOC100037818 LOC100264670 LOC7490528 LOC25486582 LOC123086367 LOC123096610 LOC123448177 LOC107907076 LOC107958823 LOC106363669 LOC106413401 CHLRE_16g688750v5 LOC110435668 LOC8071401 LOC102589973 LOC102614437 LOC100843302 LOC107814039 LOC107791032
Function* RED family protein suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressors of mec-8 and unc-52 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 uncharacterized protein suppressor of mec-8 and unc-52 protein homolog 2-like suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2 suppressor of mec-8 and unc-52 protein homolog 2-like suppressor of mec-8 and unc-52 protein homolog 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03082 ATP-dependent chromatin remodeling 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817187 100526981 100775354 101259647 4349762 103651660 100037818 100264670 7490528 25486582 123086367 123096610 123448177 107907076 107958823 106363669 106413401 5724812 110435668 8071401 102589973 102614437 100843302 107814039 107791032
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