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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g106150v5   uncharacterized protein 
 ath-u.5   AT1G01940   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 gma-u.5   100777417   peptidyl-prolyl cis-trans isomerase CYP18-1 
 gma-u.5   CYP42   peptidyl-prolyl cis-trans isomerase CYP42 
 sly-u.5   101258772   peptidyl-prolyl cis-trans isomerase CYP18-1 
 osa-u.5   4340003   peptidyl-prolyl cis-trans isomerase CYP18-1 
 zma-u.5   100381373   peptidyl-prolyl cis-trans isomerase-like 3 
 zma-u.5   100280578   uncharacterized LOC100280578 
 vvi-u.5   100247290   peptidyl-prolyl cis-trans isomerase CYP18-1 
 ppo-u.5   7464871   peptidyl-prolyl cis-trans isomerase CYP18-1 
 ppo-u.5   7461724   peptidyl-prolyl cis-trans isomerase CYP18-1 
 mtr-u.5   25501005   peptidyl-prolyl cis-trans isomerase CYP18-1 

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Top 50 coexpressed genes to CHLRE_02g106150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g106150v5 (cre-r.1 coexpression data)

CoexMap"5725524"


creCHLRE_02g106150v5 | Entrez gene ID : 5725524      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (33 genes)  IEA  
GO:0006457 [list] [network] protein folding  (108 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (45 genes)  IEA  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
Protein XP_001699749.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 7,  cyto 2  (predict for XP_001699749.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for XP_001699749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g106150v5

.
ath-u.5
for
AT1G01940

.
gma-u.5
for
100777417

.
gma-u.5
for
CYP42

.
sly-u.5
for
101258772

.
osa-u.5
for
4340003

.
zma-u.5
for
100381373

.
zma-u.5
for
100280578

.
vvi-u.5
for
100247290

.
ppo-u.5
for
7464871

.
ppo-u.5
for
7461724

.
mtr-u.5
for
25501005

.


Ortholog ID: 9230
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G01940 CYP42 LOC100777417 LOC101258772 LOC4340003 LOC100280578 LOC100381373 LOC103843818 LOC100247290 LOC7461724 LOC7464871 LOC25501005 LOC123152132 LOC123088204 LOC123413563 LOC107900866 LOC121204468 LOC106434140 LOC106425995 CHLRE_02g106150v5 LOC8068384 LOC102601974 LOC102607207 LOC100829023 LOC107824713 LOC107826677
Function* Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein peptidyl-prolyl cis-trans isomerase CYP42 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 uncharacterized LOC100280578 peptidyl-prolyl cis-trans isomerase-like 3 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 uncharacterized protein peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1 peptidyl-prolyl cis-trans isomerase CYP18-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 3
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
osa03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03008 Ribosome biogenesis in eukaryotes 4
bra03250 Viral life cycle - HIV-1 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 5
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu04120 Ubiquitin mediated proteolysis 5
hvu03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
cre03018 RNA degradation 3
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00270 Cysteine and methionine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta04122 Sulfur relay system 2
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839309 100306466 100777417 101258772 4340003 100280578 100381373 103843818 100247290 7461724 7464871 25501005 123152132 123088204 123413563 107900866 121204468 106434140 106425995 5725524 8068384 102601974 102607207 100829023 107824713 107826677
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