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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g104350v5   uncharacterized protein 
 ath-u.5   PDIL5-3   PDI-like 5-3 
 ath-u.5   PDIL5-4   PDI-like 5-4 
 ath-u.5   AT1G50950   protein disulfide-isomerase 5-like protein (DUF1692) 
 gma-u.5   100793435   protein disulfide-isomerase 5-4 
 sly-u.5   101254614   protein disulfide isomerase-like 5-4 
 osa-u.5   4343420   protein disulfide isomerase-like 5-4 
 zma-u.5   606417   protein disulfide isomerase 12 
 vvi-u.5   100265937   protein disulfide isomerase-like 5-4 
 ppo-u.5   7470937   protein disulfide-isomerase 5-4 
 ppo-u.5   18095920   protein disulfide-isomerase 5-4 
 mtr-u.5   11445916   protein disulfide-isomerase 5-4 

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Top 50 coexpressed genes to CHLRE_02g104350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g104350v5 (cre-r.1 coexpression data)

CoexMap"5725538"


creCHLRE_02g104350v5 | Entrez gene ID : 5725538      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030134 [list] [network] COPII-coated ER to Golgi transport vesicle  (28 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (454 genes)  IEA  
GO MF
Protein XP_001699770.1 [sequence] [blastp]
XP_042927406.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  mito 3,  E.R. 3,  cyto_plas 2  (predict for XP_001699770.1)
plas 3,  mito 3,  E.R. 3,  cyto_plas 2  (predict for XP_042927406.1)
Subcellular
localization
TargetP
other 5  (predict for XP_001699770.1)
other 5  (predict for XP_042927406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g104350v5

.
ath-u.5
for
PDIL5-3

.
ath-u.5
for
PDIL5-4

.
ath-u.5
for
AT1G50950

.
gma-u.5
for
100793435

.
sly-u.5
for
101254614

.
osa-u.5
for
4343420

.
zma-u.5
for
606417

.
vvi-u.5
for
100265937

.
ppo-u.5
for
7470937

.
ppo-u.5
for
18095920

.
mtr-u.5
for
11445916

.


Ortholog ID: 3930
Species ath ath gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT1G50950 PDIL5-3 LOC100793435 LOC101254614 LOC4343420 LOC606417 LOC103869307 LOC103859866 LOC100265937 LOC18095920 LOC7470937 LOC11445916 LOC123044653 LOC123188409 LOC123425875 LOC107918370 LOC107941987 LOC106389275 CHLRE_02g104350v5 LOC110432870 LOC102606188 LOC102610461 LOC100843537 LOC107784201 LOC107785202
Function* protein disulfide-isomerase 5-like protein (DUF1692) PDI-like 5-3 protein disulfide-isomerase 5-4 protein disulfide isomerase-like 5-4 protein disulfide isomerase-like 5-4 protein disulfide isomerase 12 protein disulfide-isomerase 5-3 protein disulfide-isomerase 5-3 protein disulfide isomerase-like 5-4 protein disulfide-isomerase 5-4 protein disulfide-isomerase 5-4 protein disulfide-isomerase 5-4 protein disulfide isomerase-like 5-4 protein disulfide isomerase-like 5-4 protein disulfide isomerase-like 5-4 protein disulfide-isomerase 5-3 protein disulfide-isomerase 5-3 protein disulfide-isomerase 5-3 uncharacterized protein protein disulfide isomerase-like 5-4 protein disulfide isomerase-like 5-4 protein disulfide-isomerase 5-4-like protein disulfide isomerase-like 5-4 protein disulfide-isomerase 5-3 protein disulfide-isomerase 5-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath00510 N-Glycan biosynthesis 4
ath00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03060 Protein export 3
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 11
ppo00510 N-Glycan biosynthesis 7
ppo00513 Various types of N-glycan biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 12
ppo00510 N-Glycan biosynthesis 8
ppo00513 Various types of N-glycan biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 9
mtr00510 N-Glycan biosynthesis 7
mtr00513 Various types of N-glycan biosynthesis 7
mtr04145 Phagosome 3
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00900 Terpenoid backbone biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 7
cre00510 N-Glycan biosynthesis 6
cre00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 5
sot01212 Fatty acid metabolism 5
sot01240 Biosynthesis of cofactors 3
sot01200 Carbon metabolism 2
sot00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04382 Cornified envelope formation 2
bdi00600 Sphingolipid metabolism 2
bdi03420 Nucleotide excision repair 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841517 821603 100793435 101254614 4343420 606417 103869307 103859866 100265937 18095920 7470937 11445916 123044653 123188409 123425875 107918370 107941987 106389275 5725538 110432870 102606188 102610461 100843537 107784201 107785202
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