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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g103450v5   uncharacterized protein 
 ath-u.5   MYB88   myb domain protein 88 
 ath-u.5   FLP   Duplicated homeodomain-like superfamily protein 
 gma-u.5   100803030   transcription factor MYB88 
 gma-u.5   100807667   transcription factor MYB88 
 sly-u.5   101260045   transcription factor MYB124 
 osa-u.5   4343977   transcription factor MYB124 
 zma-u.5   100381853   uncharacterized LOC100381853 
 vvi-u.5   100246639   transcription factor MYB124 
 ppo-u.5   7471495   transcription factor MYB88 
 ppo-u.5   7459044   transcription factor MYB124 
 mtr-u.5   11427731   transcription factor MYB88 
 mtr-u.5   25502747   transcription factor MYB124 

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Top 50 coexpressed genes to CHLRE_02g103450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g103450v5 (cre-r.1 coexpression data)

CoexMap"5725546"


creCHLRE_02g103450v5 | Entrez gene ID : 5725546      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (30 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (67 genes)  IEA  
Protein XP_001699782.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_001699782.2)
Subcellular
localization
TargetP
other 9  (predict for XP_001699782.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g103450v5

.
ath-u.5
for
MYB88

.
ath-u.5
for
FLP

.
gma-u.5
for
100803030

.
gma-u.5
for
100807667

.
sly-u.5
for
101260045

.
osa-u.5
for
4343977

.
zma-u.5
for
100381853

.
vvi-u.5
for
100246639

.
ppo-u.5
for
7471495

.
ppo-u.5
for
7459044

.
mtr-u.5
for
11427731

.
mtr-u.5
for
25502747

.


Ortholog ID: 4333
Species ath sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol FLP LOC101260045 LOC4343977 LOC100381853 LOC103827503 LOC103872133 LOC100246639 LOC7471495 LOC7459044 LOC25502747 LOC11427731 LOC123044121 LOC123187866 LOC123425207 LOC107948812 LOC107887116 LOC106438192 LOC106369333 CHLRE_02g103450v5 LOC8063503 LOC102589190 LOC102593320 LOC102629689 LOC100835080 LOC107793683 LOC107792411
Function* Duplicated homeodomain-like superfamily protein transcription factor MYB124 transcription factor MYB124 uncharacterized LOC100381853 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB88 transcription factor MYB88 uncharacterized LOC123425207 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB88 uncharacterized protein transcription factor MYB124 transcription factor RAX2-like myb-related protein A transcription factor MYB124 transcription factor MYB124 transcription factor MYB124-like transcription factor MYB124
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 5
osa03460 Fanconi anemia pathway 3
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837997 101260045 4343977 100381853 103827503 103872133 100246639 7471495 7459044 25502747 11427731 123044121 123187866 123425207 107948812 107887116 106438192 106369333 5725546 8063503 102589190 102593320 102629689 100835080 107793683 107792411
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