ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_02g101200v5	uncharacterized protein
ath-u.5	AT3G51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
ath-u.5	AT4G09160	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
gma-u.5	100779100	patellin-4-like
gma-u.5	100806382	patellin-3
gma-u.5	100809944	patellin-6
sly-u.5	101254657	patellin-4
sly-u.5	101255264	patellin-3-like
sly-u.5	101259282	patellin-6-like
osa-u.5	4338870	patellin-3
osa-u.5	4341809	patellin-4
osa-u.5	4338479	patellin-6
zma-u.5	100192106	uncharacterized LOC100192106
zma-u.5	100281982	patellin-5
zma-u.5	103636439	patellin-3-like
bra-r.6	103840314	patellin-4
bra-r.6	103830806	patellin-3
bra-r.6	103841094	patellin-6
vvi-u.5	100246049	patellin-3
vvi-u.5	100262778	patellin-4
vvi-u.5	100246625	patellin-6
ppo-u.5	7488745	patellin-6
ppo-u.5	18097762	patellin-3
mtr-u.5	11411118	patellin-6
mtr-u.5	25484263	patellin-4
mtr-u.5	25486320	patellin-4
tae-r.2	123056975	patellin-3
tae-r.2	123051017	patellin-6
tae-r.2	123126885	patellin-6
hvu-r.1	123437246	patellin-6
hvu-r.1	123444762	patellin-3-like
hvu-r.1	123413645	patellin-4
ghi-r.1	107904905	patellin-3
ghi-r.1	107904903	patellin-3
ghi-r.1	107913583	patellin-3
bna-r.1	106452052	patellin-2-like
bna-r.1	106438481	patellin-5
bna-r.1	106435676	patellin-5
sbi-r.1	8061600	patellin-4
sbi-r.1	8063113	patellin-3
sbi-r.1	8066780	patellin-6
sot-r.1	102580007	patellin-3
sot-r.1	102580328	patellin-3-like
sot-r.1	102592590	patellin-4
cit-r.1	102614527	patellin-3
cit-r.1	102624830	patellin-4
bdi-r.1	100843560	patellin-3
bdi-r.1	100843870	patellin-3
bdi-r.1	100822165	patellin-6
nta-r.1	107781650	patellin-3
nta-r.1	107777688	patellin-3
nta-r.1	107793044	patellin-3

Top 50 coexpressed genes to CHLRE_02g101200v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_02g101200v5 (cre-r.1 coexpression data)

CoexMap"5725565"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008289 [list] [network] lipid binding

(85 genes)

IEA

Protein

XP_001699808.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 2, pero 2

(predict for XP_001699808.2)

Subcellular
localization
TargetP

other 8

(predict for XP_001699808.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_02g101200v5	ath-u.5 for AT3G51670	ath-u.5 for AT4G09160	gma-u.5 for 100779100	gma-u.5 for 100806382	gma-u.5 for 100809944	sly-u.5 for 101254657	sly-u.5 for 101255264	sly-u.5 for 101259282	osa-u.5 for 4338870	osa-u.5 for 4341809	osa-u.5 for 4338479	zma-u.5 for 100192106	zma-u.5 for 100281982	zma-u.5 for 103636439	bra-r.6 for 103840314	bra-r.6 for 103830806	bra-r.6 for 103841094	vvi-u.5 for 100246049	vvi-u.5 for 100262778	vvi-u.5 for 100246625	ppo-u.5 for 7488745	ppo-u.5 for 18097762	mtr-u.5 for 11411118	mtr-u.5 for 25484263	mtr-u.5 for 25486320	tae-r.2 for 123056975	tae-r.2 for 123051017	tae-r.2 for 123126885	hvu-r.1 for 123437246	hvu-r.1 for 123444762	hvu-r.1 for 123413645	ghi-r.1 for 107904905	ghi-r.1 for 107904903	ghi-r.1 for 107913583	bna-r.1 for 106452052	bna-r.1 for 106438481	bna-r.1 for 106435676	sbi-r.1 for 8061600	sbi-r.1 for 8063113	sbi-r.1 for 8066780	sot-r.1 for 102580007	sot-r.1 for 102580328	sot-r.1 for 102592590	cit-r.1 for 102614527	cit-r.1 for 102624830	bdi-r.1 for 100843560	bdi-r.1 for 100843870	bdi-r.1 for 100822165	nta-r.1 for 107781650	nta-r.1 for 107777688	nta-r.1 for 107793044

Ortholog

Ortholog ID: 403

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Sec14p-like phosphatidylinositol transfer family protein

patellin-4-like

patellin-3

patellin-4

patellin-3-like

patellin-6-like

patellin-4

patellin-6

patellin-3

uncharacterized LOC100192106

patellin-5

uncharacterized LOC100282751

patellin-4

patellin-3

patellin-6

patellin-3

patellin-1

patellin-3

patellin-6

patellin-4

patellin-3

patellin-3-like

patellin-4

patellin-3-like

patellin-3

patellin-4

patellin-3-like

patellin-6-like

patellin-4-like

patellin-4

patellin-3

patellin-4

patellin-3-like

patellin-4

patellin-6

patellin-3

uncharacterized LOC107780867

patellin-4-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	4
cre00513	Various types of N-glycan biosynthesis	4
cre04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma00010	Glycolysis / Gluconeogenesis	2
gma00620	Pyruvate metabolism	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	5
bra04517	IgSF CAM signaling	5
bra04814	Motor proteins	5
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	8
ghi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	6
sbi04145	Phagosome	2
sbi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	3
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2
bdi00360	Phenylalanine metabolism	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04626	Plant-pathogen interaction	4
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi00062	Fatty acid elongation	2
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	4
nta00350	Tyrosine metabolism	4
nta00360	Phenylalanine metabolism	4
nta00410	beta-Alanine metabolism	4
nta00950	Isoquinoline alkaloid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

5725565

824330

839949

843547

100779100

100786707

101254657

101255264

101259282

4341809

4338479

4324771

100192106

100281982

100282751

103840314

103830806

103841094

100259349

100247827

18108470

7475783

120580125

25491806

11441033

123051017

123159568

123079937

123444762

123413645

123446698

107896868

107890710

107943697

106371088

106367752

106367248

8061600

8063113

8058498

102580007

102592590

102597890

102624830

102631478

102614816

100843560

100843870

100838457

107781650

107780867

107815177

The preparation time of this page was 0.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	3	3	3	3	3	3	2	3	3	3	3	3	3	3	2	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_02g101200v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_02g101200v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**