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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g061442v5   uncharacterized protein 
 ath-u.5   AT5G59140   BTB/POZ domain-containing protein 
 gma-u.5   100500097   uncharacterized LOC100500097 
 gma-u.5   100305702   uncharacterized LOC100305702 
 sly-u.5   101267899   uncharacterized LOC101267899 
 osa-u.5   4351227   uncharacterized LOC4351227 
 zma-u.5   100282398   uncharacterized LOC100282398 
 zma-u.5   100283809   uncharacterized LOC100283809 
 vvi-u.5   100258618   uncharacterized LOC100258618 
 ppo-u.5   7468608   uncharacterized LOC7468608 
 mtr-u.5   25492546   elongin-C 

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Top 50 coexpressed genes to CHLRE_01g061442v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g061442v5 (cre-r.1 coexpression data)

CoexMap"5725744"


creCHLRE_01g061442v5 | Entrez gene ID : 5725744    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04120 [list] [network] Ubiquitin mediated proteolysis (48 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (159 genes)  IEA  
GO CC
GO:0070449 [list] [network] elongin complex  (2 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (114 genes)  IEA  
Protein XP_001700238.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  nucl 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_001700238.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_001700238.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g061442v5

.
ath-u.5
for
AT5G59140

.
gma-u.5
for
100500097

.
gma-u.5
for
100305702

.
sly-u.5
for
101267899

.
osa-u.5
for
4351227

.
zma-u.5
for
100282398

.
zma-u.5
for
100283809

.
vvi-u.5
for
100258618

.
ppo-u.5
for
7468608

.
mtr-u.5
for
25492546

.


Ortholog ID: 7769
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G59140 LOC100305702 LOC100500097 LOC101267899 LOC4351227 LOC100282398 LOC100283809 LOC103856649 LOC103845345 LOC100258618 LOC7468608 LOC25492546 LOC123091747 LOC123096731 LOC123448237 LOC107935050 LOC107943614 LOC106433293 LOC106420378 CHLRE_01g061442v5 LOC8061498 LOC102603521 LOC102614386 LOC100835048 LOC107789763 LOC107829727
Function* BTB/POZ domain-containing protein uncharacterized LOC100305702 uncharacterized LOC100500097 uncharacterized LOC101267899 uncharacterized LOC4351227 uncharacterized LOC100282398 uncharacterized LOC100283809 elongin-C elongin-C uncharacterized LOC100258618 uncharacterized LOC7468608 elongin-C elongin-C elongin-C elongin-C elongin-C elongin-C elongin-C elongin-C uncharacterized protein elongin-C transcription elongation factor B polypeptide 1 uncharacterized LOC102614386 elongin-C uncharacterized LOC107789763 uncharacterized LOC107829727
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi00190 Oxidative phosphorylation 3
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 10
bna04141 Protein processing in endoplasmic reticulum 6
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna03050 Proteasome 5
bna04141 Protein processing in endoplasmic reticulum 4
bna04122 Sulfur relay system 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta04148 Efferocytosis 3
nta00100 Steroid biosynthesis 2
nta04142 Lysosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta00100 Steroid biosynthesis 2
nta04142 Lysosome 2
nta04148 Efferocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836032 100305702 100500097 101267899 4351227 100282398 100283809 103856649 103845345 100258618 7468608 25492546 123091747 123096731 123448237 107935050 107943614 106433293 106420378 5725744 8061498 102603521 102614386 100835048 107789763 107829727
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