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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g495951v5   uncharacterized protein 
 ath-u.5   Pnsl5   cyclophilin 20-2 
 gma-u.5   CYP23   peptidyl-prolyl cis-trans isomerase CYP23 
 gma-u.5   CYP10   peptidyl-prolyl cis-trans isomerase CYP10 
 sly-u.5   101263049   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 osa-u.5   4337539   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 zma-u.5   100282887   peptidyl-prolyl cis-trans isomerase 
 zma-u.5   103629299   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 vvi-u.5   100248997   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ppo-u.5   7496556   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ppo-u.5   7482801   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 mtr-u.5   25485759   photosynthetic NDH subunit of lumenal location 5, chloroplastic 

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Top 50 coexpressed genes to CHLRE_12g495951v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g495951v5 (cre-r.1 coexpression data)

CoexMap"5726097"


creCHLRE_12g495951v5 | Entrez gene ID : 5726097      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (33 genes)  IEA  
GO:0006457 [list] [network] protein folding  (108 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
Protein XP_001700546.1 [sequence] [blastp]
XP_042917998.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for XP_001700546.1)
chlo 7,  cyto 2  (predict for XP_042917998.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_001700546.1)
mito 8  (predict for XP_042917998.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g495951v5

.
ath-u.5
for
Pnsl5

.
gma-u.5
for
CYP23

.
gma-u.5
for
CYP10

.
sly-u.5
for
101263049

.
osa-u.5
for
4337539

.
zma-u.5
for
100282887

.
zma-u.5
for
103629299

.
vvi-u.5
for
100248997

.
ppo-u.5
for
7496556

.
ppo-u.5
for
7482801

.
mtr-u.5
for
25485759

.


Ortholog ID: 9091
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol Pnsl5 CYP23 CYP10 LOC101263049 LOC4337539 LOC100282887 LOC103629299 LOC103856001 LOC100248997 LOC7496556 LOC7482801 LOC25485759 LOC123179793 LOC123184521 LOC123397780 LOC107933119 LOC107905244 LOC125593377 LOC106454776 CHLRE_12g495951v5 LOC8065277 LOC102602349 LOC102625552 LOC100840120 LOC107779077 LOC107802154
Function* cyclophilin 20-2 peptidyl-prolyl cis-trans isomerase CYP23 peptidyl-prolyl cis-trans isomerase CYP10 photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic peptidyl-prolyl cis-trans isomerase photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic-like photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic uncharacterized protein photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00562 Inositol phosphate metabolism 2
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma01200 Carbon metabolism 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma01230 Biosynthesis of amino acids 4
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma00660 C5-Branched dibasic acid metabolism 3
zma01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma03010 Ribosome 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra01230 Biosynthesis of amino acids 5
bra01200 Carbon metabolism 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 5
vvi00620 Pyruvate metabolism 5
vvi01200 Carbon metabolism 5
vvi01240 Biosynthesis of cofactors 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 5
hvu00860 Porphyrin metabolism 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 5
bna00010 Glycolysis / Gluconeogenesis 4
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
cre04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00350 Tyrosine metabolism 3
sbi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00860 Porphyrin metabolism 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 6
bdi03010 Ribosome 3
bdi00860 Porphyrin metabolism 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831151 100796688 100777088 101263049 4337539 100282887 103629299 103856001 100248997 7496556 7482801 25485759 123179793 123184521 123397780 107933119 107905244 125593377 106454776 5726097 8065277 102602349 102625552 100840120 107779077 107802154
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