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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g312350v5   uncharacterized protein 
 ath-u.5   POLA3   DNA primase POLA3 
 gma-u.5   100780574   DNA primase small subunit 
 sly-u.5   101258292   uncharacterized LOC101258292 
 osa-u.5   9267485   uncharacterized LOC9267485 
 zma-u.5   103631463   DNA primase small subunit 
 vvi-u.5   100260326   uncharacterized LOC100260326 
 ppo-u.5   7465480   uncharacterized LOC7465480 
 mtr-u.5   11439115   DNA primase small subunit 

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Top 50 coexpressed genes to CHLRE_07g312350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g312350v5 (cre-r.1 coexpression data)

CoexMap"5726324"


creCHLRE_07g312350v5 | Entrez gene ID : 5726324      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03030 [list] [network] DNA replication (30 genes)
GO BP
GO:0006269 [list] [network] DNA replication, synthesis of primer  (2 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (4 genes)  IEA  
GO MF
Protein XP_042922381.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  pero 1,  nucl 1,  E.R. 1,  chlo_mito 1,  cyto_mito 1,  mito_plas 1  (predict for XP_042922381.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_042922381.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g312350v5

.
ath-u.5
for
POLA3

.
gma-u.5
for
100780574

.
sly-u.5
for
101258292

.
osa-u.5
for
9267485

.
zma-u.5
for
103631463

.
vvi-u.5
for
100260326

.
ppo-u.5
for
7465480

.
mtr-u.5
for
11439115

.


Ortholog ID: 8176
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi bdi nta nta
Symbol POLA3 LOC100780574 LOC101258292 LOC9267485 LOC103631463 LOC103864126 LOC100260326 LOC7465480 LOC11439115 LOC123129425 LOC123052974 LOC123440754 LOC107947091 LOC107947115 LOC106376473 CHLRE_07g312350v5 LOC8061908 LOC102590488 LOC102613266 LOC100824089 LOC100835644 LOC107779384 LOC107784359
Function* DNA primase POLA3 DNA primase small subunit uncharacterized LOC101258292 uncharacterized LOC9267485 DNA primase small subunit DNA primase small subunit uncharacterized LOC100260326 uncharacterized LOC7465480 DNA primase small subunit DNA primase small subunit DNA primase small subunit DNA primase small subunit-like DNA primase small subunit DNA primase small subunit DNA primase small subunit-like uncharacterized protein DNA primase small subunit DNA primase small subunit uncharacterized LOC102613266 DNA primase small subunit-like DNA primase small subunit uncharacterized LOC107779384 uncharacterized LOC107784359
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 11
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 13
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 13
mtr03420 Nucleotide excision repair 4
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03020 RNA polymerase 3
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03030 DNA replication 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna03430 Mismatch repair 5
bna03460 Fanconi anemia pathway 3
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 10
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 7
nta03440 Homologous recombination 4
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 14
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834193 100780574 101258292 9267485 103631463 103864126 100260326 7465480 11439115 123129425 123052974 123440754 107947091 107947115 106376473 5726324 8061908 102590488 102613266 100824089 100835644 107779384 107784359
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