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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_05g244850v5   uncharacterized protein 
 ath-u.5   AT1G69680   ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 
 gma-u.5   100786093   ran guanine nucleotide release factor-like 
 gma-u.5   100776486   ran guanine nucleotide release factor 
 sly-u.5   101249289   uncharacterized LOC101249289 
 osa-u.5   4336045   ran guanine nucleotide release factor 
 zma-u.5   100193020   uncharacterized LOC100193020 
 vvi-u.5   100256809   uncharacterized LOC100256809 
 ppo-u.5   112323899   uncharacterized LOC112323899 
 mtr-u.5   25502517   ran guanine nucleotide release factor 
 mtr-u.5   11423767   ran guanine nucleotide release factor 

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Top 50 coexpressed genes to CHLRE_05g244850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_05g244850v5 (cre-r.1 coexpression data)

CoexMap"5726468"


creCHLRE_05g244850v5 | Entrez gene ID : 5726468      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006606 [list] [network] protein import into nucleus  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (25 genes)  IEA  
GO:0031267 [list] [network] small GTPase binding  (32 genes)  IEA  
Protein XP_001700745.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 4,  nucl 1,  mito 1  (predict for XP_001700745.1)
Subcellular
localization
TargetP
other 6  (predict for XP_001700745.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_05g244850v5

.
ath-u.5
for
AT1G69680

.
gma-u.5
for
100786093

.
gma-u.5
for
100776486

.
sly-u.5
for
101249289

.
osa-u.5
for
4336045

.
zma-u.5
for
100193020

.
vvi-u.5
for
100256809

.
ppo-u.5
for
112323899

.
mtr-u.5
for
25502517

.
mtr-u.5
for
11423767

.


Ortholog ID: 5913
Species ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae hvu ghi ghi bna cre sbi sot cit bdi bdi nta nta
Symbol AT1G69680 LOC100776486 LOC100786093 LOC101249289 LOC4336045 LOC100193020 LOC103831370 LOC103830918 LOC100256809 LOC112323899 LOC11423767 LOC25502517 LOC123045659 LOC123426907 LOC107918495 LOC107893950 LOC106404533 CHLRE_05g244850v5 LOC8057470 LOC102605065 LOC102622878 LOC100821548 LOC100846565 LOC107814465 LOC107780806
Function* ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) ran guanine nucleotide release factor ran guanine nucleotide release factor-like uncharacterized LOC101249289 ran guanine nucleotide release factor uncharacterized LOC100193020 ran guanine nucleotide release factor ran guanine nucleotide release factor uncharacterized LOC100256809 uncharacterized LOC112323899 ran guanine nucleotide release factor ran guanine nucleotide release factor ran guanine nucleotide release factor ran guanine nucleotide release factor-like ran guanine nucleotide release factor ran guanine nucleotide release factor ran guanine nucleotide release factor-like uncharacterized protein probable ran guanine nucleotide release factor probable ran guanine nucleotide release factor uncharacterized LOC102622878 ran guanine nucleotide release factor ran guanine nucleotide release factor uncharacterized LOC107814465 uncharacterized LOC107780806
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 6
ath03008 Ribosome biogenesis in eukaryotes 4
ath03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03013 Nucleocytoplasmic transport 4
zma03250 Viral life cycle - HIV-1 4
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00760 Nicotinate and nicotinamide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 8
tae03008 Ribosome biogenesis in eukaryotes 4
tae03250 Viral life cycle - HIV-1 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 8
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
sot03008 Ribosome biogenesis in eukaryotes 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03050 Proteasome 2
cit03040 Spliceosome 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
bdi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 3
bdi03250 Viral life cycle - HIV-1 3
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
nta00230 Purine metabolism 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
nta00230 Purine metabolism 2
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843304 100776486 100786093 101249289 4336045 100193020 103831370 103830918 100256809 112323899 11423767 25502517 123045659 123426907 107918495 107893950 106404533 5726468 8057470 102605065 102622878 100821548 100846565 107814465 107780806
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