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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g467569v5   uncharacterized protein 
 ath-u.5   ATPD   F-type H+-transporting ATPase subunit delta 
 gma-u.5   100815063   ATP synthase delta chain, chloroplastic 
 gma-u.5   100819224   ATP synthase delta chain, chloroplastic 
 sly-u.5   101254882   ATP synthase delta chain, chloroplastic 
 osa-u.5   9270776   ATP synthase delta chain, chloroplastic 
 zma-u.5   100281924   ATP synthase delta chain 
 zma-u.5   103627748   ATP synthase delta chain, chloroplastic 
 vvi-u.5   100251062   ATP synthase delta chain, chloroplastic 
 ppo-u.5   18104499   ATP synthase delta chain, chloroplastic 
 ppo-u.5   7467447   ATP synthase subunit delta, chloroplastic 
 mtr-u.5   11407939   ATP synthase delta chain, chloroplastic 

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Top 50 coexpressed genes to CHLRE_11g467569v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g467569v5 (cre-r.1 coexpression data)

CoexMap"5726953"


creCHLRE_11g467569v5 | Entrez gene ID : 5726953      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00190 [list] [network] Oxidative phosphorylation (84 genes)
cre00195 [list] [network] Photosynthesis (62 genes)
GO BP
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II  (1 genes)  IEA  
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (3 genes)  IEA  
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (13 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (9 genes)  IEA  
Protein XP_001701377.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_001701377.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_001701377.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g467569v5

.
ath-u.5
for
ATPD

.
gma-u.5
for
100815063

.
gma-u.5
for
100819224

.
sly-u.5
for
101254882

.
osa-u.5
for
9270776

.
zma-u.5
for
100281924

.
zma-u.5
for
103627748

.
vvi-u.5
for
100251062

.
ppo-u.5
for
18104499

.
ppo-u.5
for
7467447

.
mtr-u.5
for
11407939

.


Ortholog ID: 6600
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ATPD LOC100819224 LOC100815063 LOC101254882 LOC9270776 LOC100281924 LOC103627748 LOC103829310 LOC103858533 LOC100251062 LOC18104499 LOC7467447 LOC11407939 LOC123128356 LOC123138205 LOC123402736 LOC107932688 LOC107936179 LOC106411339 LOC106438494 CHLRE_11g467569v5 LOC8066424 LOC102591175 LOC102610762 LOC100828294 LOC107797795 LOC107821979
Function* F-type H+-transporting ATPase subunit delta ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic-like ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic-like ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic uncharacterized protein ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 17
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 10
gma00190 Oxidative phosphorylation 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 3
gma00190 Oxidative phosphorylation 2
gma04626 Plant-pathogen interaction 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 7
osa00190 Oxidative phosphorylation 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 16
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00710 Carbon fixation by Calvin cycle 4
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo03010 Ribosome 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 10
tae00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 9
tae00195 Photosynthesis 9
tae01200 Carbon metabolism 3
tae00196 Photosynthesis - antenna proteins 2
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 6
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 4
hvu03010 Ribosome 3
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00195 Photosynthesis 5
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
bna00190 Oxidative phosphorylation 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 5
cre01200 Carbon metabolism 5
cre00195 Photosynthesis 5
cre00190 Oxidative phosphorylation 4
cre00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 10
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi01230 Biosynthesis of amino acids 3
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 3
nta00190 Oxidative phosphorylation 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 4
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826551 100819224 100815063 101254882 9270776 100281924 103627748 103829310 103858533 100251062 18104499 7467447 11407939 123128356 123138205 123402736 107932688 107936179 106411339 106438494 5726953 8066424 102591175 102610762 100828294 107797795 107821979
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