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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g082350v5   uncharacterized protein 
 ath-u.5   CUTA   Nitrogen regulatory PII-like, alpha/beta 
 gma-u.5   100819511   CutA1 domain-containing protein 
 gma-u.5   100792337   protein CutA, chloroplastic-like 
 sly-u.5   101249071   protein CutA, chloroplastic 
 osa-u.5   4348499   protein CutA 1, chloroplastic-like 
 zma-u.5   100304379   uncharacterized LOC100304379 
 vvi-u.5   100252419   protein CutA, chloroplastic 
 ppo-u.5   7467188   protein CutA, chloroplastic 
 mtr-u.5   11433379   protein CutA 1, chloroplastic 
 tae-r.2   123054701   protein CutA 1, chloroplastic 
 tae-r.2   123190553   protein CutA 1, chloroplastic 
 tae-r.2   123046862   protein CutA 1, chloroplastic 
 hvu-r.1   123427956   protein CutA 1, chloroplastic 
 ghi-r.1   107957809   protein CutA, chloroplastic 
 ghi-r.1   121218208   protein CutA, chloroplastic 
 bna-r.1   106347194   protein CutA, chloroplastic 
 bna-r.1   106451176   protein CutA, chloroplastic 
 sbi-r.1   8057646   protein CutA 1, chloroplastic 
 sbi-r.1   8057647   protein CutA, chloroplastic 
 sot-r.1   102587193   protein CutA, chloroplastic 
 cit-r.1   102630423   protein CutA, chloroplastic 
 bdi-r.1   100828411   protein CutA 1, chloroplastic 
 nta-r.1   107817862   protein CutA, chloroplastic-like 
 nta-r.1   107802963   protein CutA, chloroplastic 

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Top 50 coexpressed genes to CHLRE_02g082350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g082350v5 (cre-r.1 coexpression data)

CoexMap"5727326"


creCHLRE_02g082350v5 | Entrez gene ID : 5727326      
Species cre ath gma sly osa zma vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta bra
Paralog 1 1 2 1 1 1 1 1 1 3 1 2 2 2 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010038 [list] [network] response to metal ion  (7 genes)  IEA  
GO CC
GO MF
GO:0005507 [list] [network] copper ion binding  (28 genes)  IEA  
Protein XP_042926892.1 [sequence] [blastp]
XP_042926893.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_042926892.1)
chlo 8,  nucl 1,  mito 1,  extr 1  (predict for XP_042926893.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_042926892.1)
scret 8  (predict for XP_042926893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g082350v5
ath-u.5
for
CUTA
gma-u.5
for
100819511
gma-u.5
for
100792337
sly-u.5
for
101249071
osa-u.5
for
4348499
zma-u.5
for
100304379
vvi-u.5
for
100252419
ppo-u.5
for
7467188
mtr-u.5
for
11433379
tae-r.2
for
123054701
tae-r.2
for
123190553
tae-r.2
for
123046862
hvu-r.1
for
123427956
ghi-r.1
for
107957809
ghi-r.1
for
121218208
bna-r.1
for
106347194
bna-r.1
for
106451176
sbi-r.1
for
8057646
sbi-r.1
for
8057647
sot-r.1
for
102587193
cit-r.1
for
102630423
bdi-r.1
for
100828411
nta-r.1
for
107817862
nta-r.1
for
107802963


Ortholog ID: 9415
Species cre ath gma gma sly osa zma vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol CHLRE_02g082350v5 CUTA LOC100819511 LOC100792337 LOC101249071 LOC4348499 LOC100304379 LOC100252419 LOC7467188 LOC11433379 LOC123054701 LOC123190553 LOC123046862 LOC123427956 LOC107957809 LOC121218208 LOC106347194 LOC106451176 LOC8057646 LOC8057647 LOC102587193 LOC102630423 LOC100828411 LOC107817862 LOC107802963
Function* uncharacterized protein Nitrogen regulatory PII-like, alpha/beta CutA1 domain-containing protein protein CutA, chloroplastic-like protein CutA, chloroplastic protein CutA 1, chloroplastic-like uncharacterized LOC100304379 protein CutA, chloroplastic protein CutA, chloroplastic protein CutA 1, chloroplastic protein CutA 1, chloroplastic protein CutA 1, chloroplastic protein CutA 1, chloroplastic protein CutA 1, chloroplastic protein CutA, chloroplastic protein CutA, chloroplastic protein CutA, chloroplastic protein CutA, chloroplastic protein CutA 1, chloroplastic protein CutA, chloroplastic protein CutA, chloroplastic protein CutA, chloroplastic protein CutA 1, chloroplastic protein CutA, chloroplastic-like protein CutA, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 5
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04136 Autophagy - other 2
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00670 One carbon pool by folate 2
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04145 Phagosome 5
bna04148 Efferocytosis 5
bna00620 Pyruvate metabolism 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04145 Phagosome 5
bna04148 Efferocytosis 5
bna04141 Protein processing in endoplasmic reticulum 4
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi01240 Biosynthesis of cofactors 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi00270 Cysteine and methionine metabolism 2
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 3
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 3
nta00940 Phenylpropanoid biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727326 817940 100819511 100792337 101249071 4348499 100304379 100252419 7467188 11433379 123054701 123190553 123046862 123427956 107957809 121218208 106347194 106451176 8057646 8057647 102587193 102630423 100828411 107817862 107802963
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