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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g353550v5   uncharacterized protein 
 ath-u.5   AT5G11900   Translation initiation factor SUI1 family protein 
 gma-u.5   100780198   translation machinery-associated protein 22 
 gma-u.5   100306708   putative translation machinery-associated protein 
 sly-u.5   101244257   translation initiation factor SUI1 family protein 
 sly-u.5   101268202   translation machinery-associated protein 22-like 
 osa-u.5   4327323   translation machinery-associated protein 22 
 zma-u.5   100192042   Translation initiation factor SUI1 family protein 
 zma-u.5   100280975   uncharacterized LOC100280975 
 vvi-u.5   100264692   translation machinery-associated protein 22 
 vvi-u.5   100252472   translation machinery-associated protein 22 
 ppo-u.5   7462255   translation machinery-associated protein 22 
 ppo-u.5   7476654   translation machinery-associated protein 22 
 mtr-u.5   11445852   translation machinery-associated protein 22 

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Top 50 coexpressed genes to CHLRE_07g353550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g353550v5 (cre-r.1 coexpression data)

CoexMap"5727588"


creCHLRE_07g353550v5 | Entrez gene ID : 5727588    
Species cre ath gma sly osa zma vvi ppo mtr nta bna tae bdi sot bra sbi hvu cit ghi
Paralog 1 1 2 2 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002188 [list] [network] translation reinitiation  (2 genes)  IEA  
GO:0001731 [list] [network] formation of translation preinitiation complex  (7 genes)  IEA  
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
Protein XP_001702041.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for XP_001702041.2)
Subcellular
localization
TargetP
other 8  (predict for XP_001702041.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g353550v5

.
ath-u.5
for
AT5G11900

.
gma-u.5
for
100780198

.
gma-u.5
for
100306708

.
sly-u.5
for
101244257

.
sly-u.5
for
101268202

.
osa-u.5
for
4327323

.
zma-u.5
for
100192042

.
zma-u.5
for
100280975

.
vvi-u.5
for
100264692

.
vvi-u.5
for
100252472

.
ppo-u.5
for
7462255

.
ppo-u.5
for
7476654

.
mtr-u.5
for
11445852

.


Ortholog ID: 5372
Species ath gma gma sly sly osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit cit bdi nta nta
Symbol AT5G11900 LOC100306708 LOC100780198 LOC101244257 LOC101268202 LOC4327323 LOC100192042 LOC100280975 LOC103846684 LOC100252472 LOC100264692 LOC7462255 LOC7476654 LOC11445852 LOC123077403 LOC123060352 LOC123442883 LOC107901483 LOC107932284 LOC106430914 CHLRE_07g353550v5 LOC8084342 LOC102590541 LOC102611868 LOC102623929 LOC100838976 LOC107781414 LOC107788087
Function* Translation initiation factor SUI1 family protein putative translation machinery-associated protein translation machinery-associated protein 22 translation initiation factor SUI1 family protein translation machinery-associated protein 22-like translation machinery-associated protein 22 Translation initiation factor SUI1 family protein uncharacterized LOC100280975 uncharacterized LOC103846684 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 uncharacterized protein translation machinery-associated protein 22 translation machinery-associated protein 22-like translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22 translation machinery-associated protein 22-like translation machinery-associated protein 22
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma04141 Protein processing in endoplasmic reticulum 4
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
osa00230 Purine metabolism 2
osa00730 Thiamine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 3
zma00513 Various types of N-glycan biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
vvi04145 Phagosome 4
vvi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03050 Proteasome 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04141 Protein processing in endoplasmic reticulum 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu04130 SNARE interactions in vesicular transport 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00190 Oxidative phosphorylation 5
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
bna00510 N-Glycan biosynthesis 3
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00190 Oxidative phosphorylation 4
nta00640 Propanoate metabolism 3
nta00020 Citrate cycle (TCA cycle) 3
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831063 100306708 100780198 101244257 101268202 4327323 100192042 100280975 103846684 100252472 100264692 7462255 7476654 11445852 123077403 123060352 123442883 107901483 107932284 106430914 5727588 8084342 102590541 102611868 102623929 100838976 107781414 107788087
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