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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g005150v5   uncharacterized protein 
 ath-u.5   AGT   alanine:glyoxylate aminotransferase 
 gma-u.5   732565   serine glyoxylate aminotransferase 3 
 gma-u.5   100786630   serine--glyoxylate aminotransferase-like 
 sly-u.5   101055519   Hop-interacting protein THI032 
 osa-u.5   4345962   serine--glyoxylate aminotransferase 
 zma-u.5   100281949   Serine--glyoxylate aminotransferase 
 vvi-u.5   100261927   serine--glyoxylate aminotransferase 
 ppo-u.5   7467398   serine--glyoxylate aminotransferase 
 ppo-u.5   7467988   serine--glyoxylate aminotransferase 
 mtr-u.5   11440516   serine--glyoxylate aminotransferase 
 mtr-u.5   11423326   serine--glyoxylate aminotransferase 

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Top 50 coexpressed genes to CHLRE_01g005150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g005150v5 (cre-r.1 coexpression data)

CoexMap"5727647"


creCHLRE_01g005150v5 | Entrez gene ID : 5727647      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00250 [list] [network] Alanine, aspartate and glutamate metabolism (28 genes)
cre00260 [list] [network] Glycine, serine and threonine metabolism (35 genes)
cre00630 [list] [network] Glyoxylate and dicarboxylate metabolism (43 genes)
cre01200 [list] [network] Carbon metabolism (143 genes)
cre01210 [list] [network] 2-Oxocarboxylic acid metabolism (46 genes)
cre04146 [list] [network] Peroxisome (43 genes)
GO BP
GO:0019265 [list] [network] glycine biosynthetic process, by transamination of glyoxylate  (2 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (32 genes)  IEA  
GO MF
GO:0004760 [list] [network] L-serine-pyruvate transaminase activity  (2 genes)  IEA  
GO:0008453 [list] [network] alanine-glyoxylate transaminase activity  (4 genes)  IEA  
Protein XP_001702106.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_001702106.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_001702106.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g005150v5

.
ath-u.5
for
AGT

.
gma-u.5
for
732565

.
gma-u.5
for
100786630

.
sly-u.5
for
101055519

.
osa-u.5
for
4345962

.
zma-u.5
for
100281949

.
vvi-u.5
for
100261927

.
ppo-u.5
for
7467398

.
ppo-u.5
for
7467988

.
mtr-u.5
for
11440516

.
mtr-u.5
for
11423326

.


Ortholog ID: 6487
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AGT LOC732565 LOC100786630 LOC101055519 LOC4345962 LOC100281949 LOC103860370 LOC103837641 LOC100261927 LOC7467398 LOC7467988 LOC11423326 LOC11440516 LOC123155556 LOC123164287 LOC123410884 LOC107939451 LOC107906707 LOC125592607 LOC125574970 CHLRE_01g005150v5 LOC8055196 LOC102592345 LOC102610141 LOC100842260 LOC107795801 LOC107827351
Function* alanine:glyoxylate aminotransferase serine glyoxylate aminotransferase 3 serine--glyoxylate aminotransferase-like Hop-interacting protein THI032 serine--glyoxylate aminotransferase Serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase-like serine--glyoxylate aminotransferase-like uncharacterized protein serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase serine--glyoxylate aminotransferase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00630 Glyoxylate and dicarboxylate metabolism 7
ath00710 Carbon fixation by Calvin cycle 6
ath00260 Glycine, serine and threonine metabolism 4
ath00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00630 Glyoxylate and dicarboxylate metabolism 10
gma00260 Glycine, serine and threonine metabolism 6
gma04146 Peroxisome 4
gma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 10
gma01200 Carbon metabolism 10
gma00260 Glycine, serine and threonine metabolism 6
gma04146 Peroxisome 4
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00710 Carbon fixation by Calvin cycle 6
sly00260 Glycine, serine and threonine metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa00710 Carbon fixation by Calvin cycle 4
osa00260 Glycine, serine and threonine metabolism 3
osa00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00630 Glyoxylate and dicarboxylate metabolism 5
zma04146 Peroxisome 5
zma00250 Alanine, aspartate and glutamate metabolism 4
zma00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra01200 Carbon metabolism 4
bra00260 Glycine, serine and threonine metabolism 3
bra00500 Starch and sucrose metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 9
vvi00630 Glyoxylate and dicarboxylate metabolism 5
vvi00710 Carbon fixation by Calvin cycle 5
vvi00260 Glycine, serine and threonine metabolism 4
vvi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo00630 Glyoxylate and dicarboxylate metabolism 6
ppo00710 Carbon fixation by Calvin cycle 6
ppo00250 Alanine, aspartate and glutamate metabolism 3
ppo00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo00630 Glyoxylate and dicarboxylate metabolism 7
ppo00710 Carbon fixation by Calvin cycle 6
ppo00250 Alanine, aspartate and glutamate metabolism 4
ppo00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00460 Cyanoamino acid metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
mtr01200 Carbon metabolism 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr04146 Peroxisome 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00051 Fructose and mannose metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00260 Glycine, serine and threonine metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00260 Glycine, serine and threonine metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00630 Glyoxylate and dicarboxylate metabolism 7
cre01200 Carbon metabolism 7
cre00260 Glycine, serine and threonine metabolism 6
cre00670 One carbon pool by folate 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 11
cit00710 Carbon fixation by Calvin cycle 7
cit00630 Glyoxylate and dicarboxylate metabolism 5
cit00195 Photosynthesis 4
cit00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi00260 Glycine, serine and threonine metabolism 3
bdi04146 Peroxisome 3
bdi00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815822 732565 100786630 101055519 4345962 100281949 103860370 103837641 100261927 7467398 7467988 11423326 11440516 123155556 123164287 123410884 107939451 107906707 125592607 125574970 5727647 8055196 102592345 102610141 100842260 107795801 107827351
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