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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g496800v5   uncharacterized protein 
 ath-u.5   AT2G44525   NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) 
 ath-u.5   AT3G60150   NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) 
 gma-u.5   100816956   uncharacterized LOC100816956 
 sly-u.5   101266454   uncharacterized LOC101266454 
 zma-u.5   100276291   uncharacterized LOC100276291 
 vvi-u.5   100249656   uncharacterized LOC100249656 
 ppo-u.5   7469387   uncharacterized LOC7469387 
 mtr-u.5   25500167   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 

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Top 50 coexpressed genes to CHLRE_12g496800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g496800v5 (cre-r.1 coexpression data)

CoexMap"5727908"


creCHLRE_12g496800v5 | Entrez gene ID : 5727908    
Species cre ath gma sly zma vvi ppo mtr sbi nta bra osa hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032981 [list] [network] mitochondrial respiratory chain complex I assembly  (12 genes)  IEA  
GO CC
GO:0005743 [list] [network] mitochondrial inner membrane  (56 genes)  IEA  
GO MF
Protein XP_001702394.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 2,  cyto 1,  mito 1  (predict for XP_001702394.2)
Subcellular
localization
TargetP
other 4  (predict for XP_001702394.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g496800v5

.
ath-u.5
for
AT2G44525

.
ath-u.5
for
AT3G60150

.
gma-u.5
for
100816956

.
sly-u.5
for
101266454

.
zma-u.5
for
100276291

.
vvi-u.5
for
100249656

.
ppo-u.5
for
7469387

.
mtr-u.5
for
25500167

.


Ortholog ID: 8430
Species ath ath gma sly zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G60150 AT2G44525 LOC100816956 LOC101266454 LOC100276291 LOC103862904 LOC103866810 LOC100249656 LOC7469387 LOC25500167 LOC123181627 LOC123127931 LOC123438725 LOC107948577 LOC107896300 LOC106445111 LOC106450790 CHLRE_12g496800v5 LOC8055616 LOC102605995 LOC102631083 LOC100831656 LOC107829281 LOC107780481
Function* NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) uncharacterized LOC100816956 uncharacterized LOC101266454 uncharacterized LOC100276291 uncharacterized LOC103862904 uncharacterized LOC103866810 uncharacterized LOC100249656 uncharacterized LOC7469387 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 uncharacterized LOC106445111 uncharacterized LOC106450790 uncharacterized protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 uncharacterized LOC102631083 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 uncharacterized LOC107829281 uncharacterized LOC107780481
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 4
ath00640 Propanoate metabolism 3
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03010 Ribosome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi03272 Virion - Hepatitis viruses 4
ghi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04130 SNARE interactions in vesicular transport 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825185 819060 100816956 101266454 100276291 103862904 103866810 100249656 7469387 25500167 123181627 123127931 123438725 107948577 107896300 106445111 106450790 5727908 8055616 102605995 102631083 100831656 107829281 107780481
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